RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 TMEM174Q8WUU8 243 aa17.54■□□□□ 0.4
CLTCL1-207ENST00000611723 NLRP7Q8WX94 980 aa17.54■□□□□ 0.4
CLTCL1-207ENST00000611723 PAWRQ96IZ0 340 aaKnown RBP17.54■□□□□ 0.4
CLTCL1-207ENST00000611723 CELF4Q9BZC1 486 aaKnown RBP17.54■□□□□ 0.4
CLTCL1-207ENST00000611723 INO80BQ9C086 356 aaPredicted RBP17.54■□□□□ 0.4
CLTCL1-207ENST00000611723 CBX8Q9HC52 389 aa17.54■□□□□ 0.4
CLTCL1-207ENST00000611723 TYW1Q9NV66 732 aaKnown RBP17.54■□□□□ 0.4
CLTCL1-207ENST00000611723 CGNQ9P2M7 1197 aaKnown RBP17.54■□□□□ 0.4
CLTCL1-207ENST00000611723 NR2E3Q9Y5X4 410 aa17.54■□□□□ 0.4
CLTCL1-207ENST00000611723 RANBP2P49792 3224 aaKnown RBP17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 SMTNL1A8MU46 457 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 ACKR2O00590 384 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 IKBKBO14920 756 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 TGFB1I1O43294 461 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 DARSP14868 501 aaKnown RBP17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 PMS1P54277 932 aaKnown RBP17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 LRRC63Q05C16 580 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 STRN3Q13033 797 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 MAPK6Q16659 721 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 KIZQ2M2Z5 673 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 ANKRD40Q6AI12 368 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 DHX40Q8IX18 779 aaKnown RBP17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 NELFCDQ8IXH7 590 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 GOLGA5Q8TBA6 731 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 GBP3Q9H0R5 595 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 MINDY3Q9H8M7 445 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 CDHR5Q9HBB8 845 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 PRMT7Q9NVM4 692 aaPredicted RBP17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 CTNND2Q9UQB3 1225 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 TRPV2Q9Y5S1 764 aa17.53■□□□□ 0.4
CLTCL1-207ENST00000611723 TLR3O15455 904 aaKnown RBP17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 CALUO43852 315 aaPredicted RBP17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 CHRNA1P02708 482 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 EIF4BP23588 611 aaKnown RBP17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 THPOP40225 353 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 TMEM62Q0P6H9 643 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 MYBPC2Q14324 1141 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 NCAPHQ15003 741 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 AMHR2Q16671 573 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 EDRF1Q3B7T1 1238 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 SPATA1Q5VX52 437 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 C12orf56Q8IXR9 622 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 ZC3H3Q8IXZ2 948 aaKnown RBP17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 CAGE1Q8TC20 777 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 ZNF668Q96K58 619 aaPredicted RBP17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 PRIMPOLQ96LW4 560 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 DUSP9Q99956 384 aaKnown RBP17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 CDY2AQ9Y6F7 541 aa17.52■□□□□ 0.4
CLTCL1-207ENST00000611723 ZMYM2Q9UBW7 1377 aa17.52■□□□□ 0.39
CLTCL1-207ENST00000611723 DCDC2CA8MYV0 355 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 INO80B-WBP1J3KQ70 363 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 M0QZ92 97 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 PRKCBP05771 671 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 IQCF3P0C7M6 154 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 ATN1P54259 1190 aaPredicted RBP17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 STX17P56962 302 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 MYL5Q02045 173 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 ZPBP2Q6X784 338 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 HS2ST1Q7LGA3 356 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 SLC9A9Q8IVB4 645 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 SYCP3Q8IZU3 236 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 SCLT1Q96NL6 688 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 OSMRQ99650 979 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 TSG101Q99816 390 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 MRPL4Q9BYD3 311 aaKnown RBP17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 RBSNQ9H1K0 784 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 STYXL1Q9Y6J8 313 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 SQORQ9Y6N5 450 aa17.51■□□□□ 0.39
CLTCL1-207ENST00000611723 SIP14410 1827 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 TRIM49BA6NDI0 452 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 EVI5O60447 810 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 CKBP12277 381 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 FKBP3Q00688 224 aaKnown RBP17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 TLE2Q04725 743 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 FAAP100Q0VG06 881 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 BFSP2Q13515 415 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 TRIM60Q495X7 471 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 TRAF7Q6Q0C0 670 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 CCDC155Q8N6L0 562 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 PPP1R16BQ96T49 567 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 ACO2Q99798 780 aaKnown RBP17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 AGPAT3Q9NRZ7 376 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 DMAC2Q9NW81 257 aa17.5■□□□□ 0.39
CLTCL1-207ENST00000611723 BECN2A8MW95 431 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 ANKRD63C9JTQ0 380 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 PITPNM1O00562 1244 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 PQBP1O60828 265 aaKnown RBP17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 EDN1P05305 212 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 GARTP22102 1010 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 ZNF618Q5T7W0 954 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 SLFN12LQ6IEE8 588 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 SLC39A4Q6P5W5 647 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 TSHZ1Q6ZSZ6 1077 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 AOPEPQ8N6M6 819 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 NOC3LQ8WTT2 800 aaKnown RBP17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 TMEM40Q8WWA1 233 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 TARS2Q9BW92 718 aaKnown RBP17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 IKZF4Q9H2S9 585 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 PTPRHQ9HD43 1115 aa17.49■□□□□ 0.39
CLTCL1-207ENST00000611723 GINS2Q9Y248 185 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms