RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 NAALADL2Q58DX5 795 aa12.8□□□□□ -0.36
LINC00539-204ENST00000608957 UBXN11Q5T124 520 aa12.8□□□□□ -0.36
LINC00539-204ENST00000608957 AXDND1Q5T1B0 1012 aaPredicted RBP12.8□□□□□ -0.36
LINC00539-204ENST00000608957 SRGAP1Q7Z6B7 1085 aa12.8□□□□□ -0.36
LINC00539-204ENST00000608957 FSIP1Q8NA03 581 aa12.8□□□□□ -0.36
LINC00539-204ENST00000608957 RNF149Q8NC42 400 aa12.8□□□□□ -0.36
LINC00539-204ENST00000608957 RNF169Q8NCN4 708 aa12.8□□□□□ -0.36
LINC00539-204ENST00000608957 TCP11Q8WWU5 503 aa12.8□□□□□ -0.36
LINC00539-204ENST00000608957 MRPS27Q92552 414 aaKnown RBP12.8□□□□□ -0.36
LINC00539-204ENST00000608957 UHRF1Q96T88 793 aaPredicted RBP12.8□□□□□ -0.36
LINC00539-204ENST00000608957 INO80BQ9C086 356 aaPredicted RBP12.8□□□□□ -0.36
LINC00539-204ENST00000608957 GPRC5CQ9NQ84 441 aa12.8□□□□□ -0.36
LINC00539-204ENST00000608957 MUC3AQ02505 3323 aa12.8□□□□□ -0.36
LINC00539-204ENST00000608957 ASAP2O43150 1006 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 B4GALT3O60512 393 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 DGAT1O75907 488 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 EOMESO95936 686 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 KCNA5P22460 613 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 RPA1P27694 616 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 PTENP60484 403 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 DLX2Q07687 328 aaPredicted RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 PTGDRQ13258 359 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 AMHR2Q16671 573 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 CTC1Q2NKJ3 1217 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 LEXMQ3ZCV2 418 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 SPOUT1Q5T280 376 aaKnown RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 TWF2Q6IBS0 349 aaKnown RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 CCDC73Q6ZRK6 1079 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 EXOC8Q8IYI6 725 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 PABPC5Q96DU9 382 aaKnown RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 GZF1Q9H116 711 aaPredicted RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 POLR3FQ9H1D9 316 aaPredicted RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 GOLPH3LQ9H4A5 285 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 FAM105AQ9NUU6 356 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 DDX19AQ9NUU7 478 aaKnown RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 DACT1Q9NYF0 836 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 TMEM63CQ9P1W3 806 aa12.79□□□□□ -0.36
LINC00539-204ENST00000608957 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
LINC00539-204ENST00000608957 PP2D1A8MPX8 630 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 H3BQ06 376 aaPredicted RBP12.78□□□□□ -0.36
LINC00539-204ENST00000608957 LAD1O00515 517 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 FSCN2O14926 492 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 FGF18O76093 207 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 XRCC6P12956 609 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00539-204ENST00000608957 LAG3P18627 525 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 CMA1P23946 247 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 AFF1P51825 1210 aaKnown RBP12.78□□□□□ -0.36
LINC00539-204ENST00000608957 ERVFC1P60507 584 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 AAK1Q2M2I8 961 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 CCDC183Q5T5S1 534 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 AGMOQ6ZNB7 445 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 MAEAQ7L5Y9 396 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 IGSF22Q8N9C0 903 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 BSNDQ8WZ55 320 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 CPB2Q96IY4 423 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 CLIC6Q96NY7 704 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 CLDND1Q9NY35 253 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
LINC00539-204ENST00000608957 PCDHB12Q9Y5F1 795 aa12.78□□□□□ -0.36
LINC00539-204ENST00000608957 FAM237AA0A1B0GTK4 181 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 TNFRSF10AO00220 468 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 HOXA2O43364 376 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 TSPAN1O60635 241 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 ZNF623O75123 536 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 TBX10O75333 385 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 NR1I2O75469 434 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 OFD1O75665 1012 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 GLP2RO95838 553 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 IL9P15248 144 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 POU5F1BQ06416 359 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 MXD4Q14582 209 aaPredicted RBP12.77□□□□□ -0.37
LINC00539-204ENST00000608957 RESP18Q5W5W9 173 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 ARL6IP4Q66PJ3 421 aaKnown RBP12.77□□□□□ -0.37
LINC00539-204ENST00000608957 SHC4Q6S5L8 630 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 MRPL10Q7Z7H8 261 aaKnown RBP12.77□□□□□ -0.37
LINC00539-204ENST00000608957 THNSL1Q8IYQ7 743 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 SMG8Q8ND04 991 aaKnown RBP12.77□□□□□ -0.37
LINC00539-204ENST00000608957 MMTAG2Q9BU76 263 aaKnown RBP12.77□□□□□ -0.37
LINC00539-204ENST00000608957 EIF2AQ9BY44 585 aaKnown RBP12.77□□□□□ -0.37
LINC00539-204ENST00000608957 IGFLR1Q9H665 355 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 POLD4Q9HCU8 107 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 CD320Q9NPF0 282 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 PCDHB2Q9Y5E7 798 aa12.77□□□□□ -0.37
LINC00539-204ENST00000608957 A0A1B0GVL5 298 aa12.76□□□□□ -0.37
LINC00539-204ENST00000608957 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
LINC00539-204ENST00000608957 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
LINC00539-204ENST00000608957 B4GALT5O43286 388 aa12.76□□□□□ -0.37
LINC00539-204ENST00000608957 EDN1P05305 212 aa12.76□□□□□ -0.37
LINC00539-204ENST00000608957 PFKFB1P16118 471 aa12.76□□□□□ -0.37
LINC00539-204ENST00000608957 CDC25AP30304 524 aa12.76□□□□□ -0.37
LINC00539-204ENST00000608957 CCT6AP40227 531 aaKnown RBP12.76□□□□□ -0.37
LINC00539-204ENST00000608957 PRPHP41219 470 aa12.76□□□□□ -0.37
LINC00539-204ENST00000608957 RBM10P98175 930 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms