RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 COL9A1P20849 921 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 PDCP20941 246 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 IBSPP21815 317 aaPredicted RBP11.09□□□□□ -0.63
CTSA-215ENST00000607187 ARL2P36404 184 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 BMPR1AP36894 532 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 GATMP50440 423 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 ATP2C1P98194 919 aaPredicted RBP11.09□□□□□ -0.63
CTSA-215ENST00000607187 ECM1Q16610 540 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 FAM102BQ5T8I3 360 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 DTHD1Q6ZMT9 781 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 BRAPQ7Z569 592 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 SRGAP1Q7Z6B7 1085 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 ECHDC2Q86YB7 292 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 MICALL1Q8N3F8 863 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 RNF149Q8NC42 400 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 SNX21Q969T3 373 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 CCDC43Q96MW1 224 aaKnown RBP11.09□□□□□ -0.63
CTSA-215ENST00000607187 DACT1Q9NYF0 836 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 LRWD1Q9UFC0 647 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 MRPL42Q9Y6G3 142 aaKnown RBP11.09□□□□□ -0.63
CTSA-215ENST00000607187 C3orf80F5H4A9 247 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 USO1O60763 962 aaKnown RBP11.08□□□□□ -0.64
CTSA-215ENST00000607187 EOMESO95936 686 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 GLRA2P23416 452 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 CTNNB1P35222 781 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 CCT6AP40227 531 aaKnown RBP11.08□□□□□ -0.64
CTSA-215ENST00000607187 PTENP60484 403 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 POU5F1BQ06416 359 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 GPM6BQ13491 265 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 PAN2Q504Q3 1202 aaKnown RBP11.08□□□□□ -0.64
CTSA-215ENST00000607187 ARL6IP4Q66PJ3 421 aaKnown RBP11.08□□□□□ -0.64
CTSA-215ENST00000607187 CATSPER4Q7RTX7 472 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 ZNF598Q86UK7 904 aaKnown RBP11.08□□□□□ -0.64
CTSA-215ENST00000607187 ASAP3Q8TDY4 903 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 MRPL38Q96DV4 380 aaKnown RBP11.08□□□□□ -0.64
CTSA-215ENST00000607187 C11orf84Q9BUA3 381 aaPredicted RBP11.08□□□□□ -0.64
CTSA-215ENST00000607187 PLVAPQ9BX97 442 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 TMEM134Q9H6X4 195 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 MINDY3Q9H8M7 445 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 AGPAT5Q9NUQ2 364 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 RNF19AQ9NV58 838 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 C5orf42Q9H799 3197 aa11.08□□□□□ -0.64
CTSA-215ENST00000607187 MYH15Q9Y2K3 1946 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 VPS37CA5D8V6 355 aaPredicted RBP11.07□□□□□ -0.64
CTSA-215ENST00000607187 TBKBP1A7MCY6 615 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 PP2D1A8MPX8 630 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 HOXA2O43364 376 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 GPR37L1O60883 481 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 FGFR1P11362 822 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 ATF7P17544 494 aaPredicted RBP11.07□□□□□ -0.64
CTSA-215ENST00000607187 CYP11B2P19099 503 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 SYT1P21579 422 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 CDC25AP30304 524 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 HOXA11P31270 313 aaPredicted RBP11.07□□□□□ -0.64
CTSA-215ENST00000607187 PHKA2P46019 1235 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 CAPSQ13938 189 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 TFDP1Q14186 410 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 PCBP1Q15365 356 aaKnown RBP eCLIP11.07□□□□□ -0.64
CTSA-215ENST00000607187 PTPROQ16827 1216 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 KRT79Q5XKE5 535 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 TWF2Q6IBS0 349 aaKnown RBP11.07□□□□□ -0.64
CTSA-215ENST00000607187 RDH13Q8NBN7 331 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 MCPH1Q8NEM0 835 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 SNX29Q8TEQ0 813 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.64
CTSA-215ENST00000607187 P2RX5Q93086 422 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 MMTAG2Q9BU76 263 aaKnown RBP11.07□□□□□ -0.64
CTSA-215ENST00000607187 NFKBIZQ9BYH8 718 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 TMEM117Q9H0C3 514 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 POLR3FQ9H1D9 316 aaPredicted RBP11.07□□□□□ -0.64
CTSA-215ENST00000607187 PRDM6Q9NQX0 595 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 FAM105AQ9NUU6 356 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 KIAA1024Q9UPX6 916 aa11.07□□□□□ -0.64
CTSA-215ENST00000607187 PIN4Q9Y237 131 aaKnown RBP11.07□□□□□ -0.64
CTSA-215ENST00000607187 TCF20Q9UGU0 1960 aaKnown RBP11.07□□□□□ -0.64
CTSA-215ENST00000607187 TDRD15B5MCY1 1934 aaKnown RBP11.06□□□□□ -0.64
CTSA-215ENST00000607187 ARHGEF35A5YM69 484 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 ZNF623O75123 536 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 SKIP12755 728 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 MBTD1Q05BQ5 628 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 NAALADL2Q58DX5 795 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 CLLU1OSQ5K130 101 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 LRRC55Q6ZSA7 311 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 MAEAQ7L5Y9 396 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 CASD1Q96PB1 797 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 LMAN2LQ9H0V9 348 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 BHMT2Q9H2M3 363 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 CWH43Q9H720 699 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 GPRC5CQ9NQ84 441 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 DDX19AQ9NUU7 478 aaKnown RBP11.06□□□□□ -0.64
CTSA-215ENST00000607187 TYW1Q9NV66 732 aaKnown RBP11.06□□□□□ -0.64
CTSA-215ENST00000607187 PLAGL2Q9UPG8 496 aa11.06□□□□□ -0.64
CTSA-215ENST00000607187 CARNS1A5YM72 827 aa11.05□□□□□ -0.64
CTSA-215ENST00000607187 VWA3AA6NCI4 1184 aa11.05□□□□□ -0.64
CTSA-215ENST00000607187 GRM6O15303 877 aa11.05□□□□□ -0.64
CTSA-215ENST00000607187 ERLIN2O94905 339 aa11.05□□□□□ -0.64
CTSA-215ENST00000607187 EYA4O95677 639 aa11.05□□□□□ -0.64
CTSA-215ENST00000607187 BMP15O95972 392 aa11.05□□□□□ -0.64
CTSA-215ENST00000607187 RAB27AP51159 221 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms