RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ELF3P78545 371 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 CDK17Q00537 523 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 RPL6Q02878 288 aaKnown RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 IFT88Q13099 833 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 DYNC1I2Q13409 638 aaKnown RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 MORC3Q14149 939 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 SNX17Q15036 470 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 KARSQ15046 597 aaKnown RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 SF3A1Q15459 793 aaKnown RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 SLC14A2Q15849 920 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCDC96Q2M329 555 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 GAB4Q2WGN9 574 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 AMOTQ4VCS5 1084 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 SPATA1Q5VX52 437 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 RESP18Q5W5W9 173 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 ANO1Q5XXA6 986 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 OLFML2BQ68BL8 750 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 CYP26C1Q6V0L0 522 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 CACNA2D4Q7Z3S7 1137 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 TRIM74Q86UV6 250 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 TRIM73Q86UV7 250 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 FOXP4Q8IVH2 680 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 NUP58Q9BVL2 599 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 SGPP1Q9BX95 441 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZSWIM4Q9H7M6 989 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 NOD2Q9HC29 1040 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 PAPOLBQ9NRJ5 636 aaKnown RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 IRAK4Q9NWZ3 460 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 SIRT5Q9NXA8 310 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 SLC5A4Q9NY91 659 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 ADD3Q9UEY8 706 aaKnown RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 LIMA1Q9UHB6 759 aaKnown RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZMYM5Q9UJ78 669 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 ASB3Q9Y575 518 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 IRAK3Q9Y616 596 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 EPN1Q9Y6I3 576 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 MRC2Q9UBG0 1479 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 NRKQ7Z2Y5 1582 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 MYH10P35580 1976 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 MYH7P12883 1935 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 RASSF10A6NK89 507 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCT8L1PA6NM43 557 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SH2B2O14492 632 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 IFIT3O14879 490 aaKnown RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZSCAN9O15535 394 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 ASAP2O43150 1006 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 TRAPPC3O43617 180 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 PRC1O43663 620 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 FOXD2O60548 495 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 CAND2O75155 1236 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 P4HBP07237 508 aaKnown RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 LINGO3P0C6S8 592 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 PDHBP11177 359 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 FDPSP14324 419 aaKnown RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 ALDH1B1P30837 517 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 KRT83P78385 493 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 RBL2Q08999 1139 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 NMIQ13287 307 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 ITGB3BPQ13352 177 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 OS9Q13438 667 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 TMED1Q13445 227 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 BIRC3Q13489 604 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SAFB2Q14151 953 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 ITIH4Q14624 930 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SEPT2Q15019 361 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 PTPAQ15257 358 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 NR0B2Q15466 257 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 CDC37Q16543 378 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 TIGD5Q53EQ6 642 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 TTMPQ5BVD1 217 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SPECC1Q5M775 1068 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SPDYCQ5MJ68 293 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 RNF187Q5TA31 235 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 AGBL2Q5U5Z8 902 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 NUGGCQ68CJ6 796 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 AGMOQ6ZNB7 445 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 Q6ZUG5 572 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 MAATS1Q7Z4T9 603 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SPATA21Q7Z572 469 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 ARHGAP22Q7Z5H3 698 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 CEP57Q86XR8 500 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 PHACTR4Q8IZ21 702 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 PDILTQ8N807 584 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 DNAJB8Q8NHS0 232 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 FAM81AQ8TBF8 368 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 MIPOL1Q8TD10 442 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SH3TC2Q8TF17 1288 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 NSMCE1Q8WV22 266 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 RNF141Q8WVD5 230 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 RIN2Q8WYP3 895 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 ARL8AQ96BM9 186 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 ACSF2Q96CM8 615 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 CYFIP2Q96F07 1278 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SEC16BQ96JE7 1060 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 ATP6V1G3Q96LB4 118 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 RNPC3Q96LT9 517 aaKnown RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 PLEKHG4BQ96PX9 1271 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 MMS19Q96T76 1030 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SLX1AQ9BQ83 275 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms