RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 TMEM119Q4V9L6 283 aa21.24■□□□□ 0.99
SRSF4-206ENST00000605204 SPOUT1Q5T280 376 aaKnown RBP21.24■□□□□ 0.99
SRSF4-206ENST00000605204 CASD1Q96PB1 797 aa21.24■□□□□ 0.99
SRSF4-206ENST00000605204 RNF19AQ9NV58 838 aa21.24■□□□□ 0.99
SRSF4-206ENST00000605204 NLRC5Q86WI3 1866 aa21.24■□□□□ 0.99
SRSF4-206ENST00000605204 E9PMD0 336 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 PTPAQ15257 358 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 ZRSR1Q15695 479 aaKnown RBP21.23■□□□□ 0.99
SRSF4-206ENST00000605204 AMHR2Q16671 573 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 AAK1Q2M2I8 961 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 CLLU1OSQ5K130 101 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 MRPL10Q7Z7H8 261 aaKnown RBP21.23■□□□□ 0.99
SRSF4-206ENST00000605204 SYT2Q8N9I0 419 aaPredicted RBP21.23■□□□□ 0.99
SRSF4-206ENST00000605204 CSRNP2Q9H175 543 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 COG5Q9UP83 839 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 ZMYM2Q9UBW7 1377 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 NCLP19338 710 aaKnown RBP21.23■□□□□ 0.99
SRSF4-206ENST00000605204 TXLNAP40222 546 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 DMP1Q13316 513 aaPredicted RBP21.23■□□□□ 0.99
SRSF4-206ENST00000605204 RINT1Q6NUQ1 792 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 RASSF8Q8NHQ8 419 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 KHSRPQ92945 711 aaKnown RBP eCLIP21.23■□□□□ 0.992e-13■■■■□ 23.7
SRSF4-206ENST00000605204 PPP2R3CQ969Q6 453 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 ZNF396Q96N95 335 aaPredicted RBP21.23■□□□□ 0.99
SRSF4-206ENST00000605204 PNMA5Q96PV4 448 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 TRIM6Q9C030 488 aaPredicted RBP21.23■□□□□ 0.99
SRSF4-206ENST00000605204 CCSER1Q9C0I3 900 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 FZD8Q9H461 694 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 TYW1Q9NV66 732 aaKnown RBP21.23■□□□□ 0.99
SRSF4-206ENST00000605204 PLAGL2Q9UPG8 496 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 SRPRBQ9Y5M8 271 aaKnown RBP21.23■□□□□ 0.99
SRSF4-206ENST00000605204 CLIC4Q9Y696 253 aa21.23■□□□□ 0.99
SRSF4-206ENST00000605204 A0A1B0GUA9 196 aa21.22■□□□□ 0.99
SRSF4-206ENST00000605204 ARF4P18085 180 aaPredicted RBP21.22■□□□□ 0.99
SRSF4-206ENST00000605204 UBXN11Q5T124 520 aa21.22■□□□□ 0.99
SRSF4-206ENST00000605204 SLC27A1Q6PCB7 646 aa21.22■□□□□ 0.99
SRSF4-206ENST00000605204 C1orf186Q6ZWK4 172 aa21.22■□□□□ 0.99
SRSF4-206ENST00000605204 URGCPQ8TCY9 931 aa21.22■□□□□ 0.99
SRSF4-206ENST00000605204 HELQQ8TDG4 1101 aa21.22■□□□□ 0.99
SRSF4-206ENST00000605204 NSUN3Q9H649 340 aaKnown RBP21.22■□□□□ 0.99
SRSF4-206ENST00000605204 KANSL3Q9P2N6 904 aa21.22■□□□□ 0.99
SRSF4-206ENST00000605204 RBM19Q9Y4C8 960 aaKnown RBP21.22■□□□□ 0.99
SRSF4-206ENST00000605204 NCK2O43639 380 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 PLA2G4BP0C869 781 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 SCP2P22307 547 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 NASPP49321 788 aaPredicted RBP21.21■□□□□ 0.99
SRSF4-206ENST00000605204 SLC12A3P55017 1021 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 SLC39A14Q15043 492 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 PDE12Q6L8Q7 609 aaKnown RBP21.21■□□□□ 0.99
SRSF4-206ENST00000605204 KCNK18Q7Z418 384 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 APBB1IPQ7Z5R6 666 aaPredicted RBP21.21■□□□□ 0.99
SRSF4-206ENST00000605204 KLHL23Q8NBE8 558 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 COLGALT1Q8NBJ5 622 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 BSNDQ8WZ55 320 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 HLA-CQ95604 372 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 ZNF558Q96NG5 402 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 CWH43Q9H720 699 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 RSAD1Q9HA92 442 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 LZTS1Q9Y250 596 aa21.21■□□□□ 0.99
SRSF4-206ENST00000605204 ACKR2O00590 384 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 N4BP3O15049 544 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 GRM6O15303 877 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 HIP1RO75146 1068 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 SSBP05455 408 aaKnown RBP eCLIP21.2■□□□□ 0.98
SRSF4-206ENST00000605204 ZSCAN22P10073 491 aaPredicted RBP21.2■□□□□ 0.98
SRSF4-206ENST00000605204 PRPF4BQ13523 1007 aaKnown RBP21.2■□□□□ 0.98
SRSF4-206ENST00000605204 NOMO2Q5JPE7 1267 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 ATL3Q6DD88 541 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 THNSL1Q8IYQ7 743 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 USP28Q96RU2 1077 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 RUSC1Q9BVN2 902 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 CCDC113Q9H0I3 377 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 EPHX3Q9H6B9 360 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 STK39Q9UEW8 545 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 CCDC39Q9UFE4 941 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 PUF60Q9UHX1 559 aaKnown RBP21.2■□□□□ 0.98
SRSF4-206ENST00000605204 FBXO2Q9UK22 296 aaPredicted RBP21.2■□□□□ 0.98
SRSF4-206ENST00000605204 ODF2LQ9ULJ1 636 aa21.2■□□□□ 0.98
SRSF4-206ENST00000605204 FSD2A1L4K1 749 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 H0YCG3 227 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 INPPL1O15357 1258 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 FGF18O76093 207 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 ITGB1P05556 798 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 PRKCBP05771 671 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 ITGA4P13612 1032 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 PLCB3Q01970 1234 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 KCNT2Q6UVM3 1135 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 KRI1Q8N9T8 703 aaKnown RBP21.19■□□□□ 0.98
SRSF4-206ENST00000605204 SPIRE2Q8WWL2 714 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 ADPGKQ9BRR6 497 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 LARSQ9P2J5 1176 aaKnown RBP21.19■□□□□ 0.98
SRSF4-206ENST00000605204 STK17AQ9UEE5 414 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 IPPQ9Y573 584 aa21.19■□□□□ 0.98
SRSF4-206ENST00000605204 OFD1O75665 1012 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 YEATS4O95619 227 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 PLCG1P19174 1290 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 PLA2G5P39877 138 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 NPTX2P47972 431 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 ALDH7A1P49419 539 aaKnown RBP21.18■□□□□ 0.98
SRSF4-206ENST00000605204 SMTNP53814 917 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms