RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 DENND4AQ7Z401 1863 aa14.38□□□□□ -0.11
NEK4P3-201ENST00000604859 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 DKC1O60832 514 aaKnown RBP eCLIP14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 P4HBP07237 508 aaKnown RBP14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 SRGAP2CP0DJJ0 459 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 HOXA11P31270 313 aaPredicted RBP14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 CLCN4P51793 760 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 CLCN5P51795 746 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 PPP2R5CQ13362 524 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 NPY5RQ15761 445 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 INF2Q27J81 1249 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 LETM2Q2VYF4 491 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 SRGAP1Q7Z6B7 1085 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 ZNF579Q8NAF0 562 aaKnown RBP14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 FEZF2Q8TBJ5 459 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 PRPF31Q8WWY3 499 aaKnown RBP14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 CEP170P1Q96L14 293 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 FAM20AQ96MK3 541 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 FAM193BQ96PV7 902 aaPredicted RBP14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 TMEM175Q9BSA9 504 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 RSAD1Q9HA92 442 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 ZSWIM6Q9HCJ5 1215 aa14.37□□□□□ -0.11
NEK4P3-201ENST00000604859 NRP1O14786 923 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 SLC37A4O43826 429 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 B4GALT3O60512 393 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 LILRB3O75022 631 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 SSBP05455 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 CNPP09543 421 aaKnown RBP14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 AFF1P51825 1210 aaKnown RBP14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 PPP4R3AQ6IN85 833 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 CPLX2Q6PUV4 134 aaKnown RBP14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 OTOP3Q7RTS5 596 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 PSPC1Q8WXF1 523 aaKnown RBP14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 TMEM143Q96AN5 459 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 SNX27Q96L92 541 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 AIFM3Q96NN9 605 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 DHX33Q9H6R0 707 aaKnown RBP14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 MINDY3Q9H8M7 445 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 KCNMB3Q9NPA1 279 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 UBN1Q9NPG3 1134 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 MRPL17Q9NRX2 175 aaKnown RBP14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 VAV3Q9UKW4 847 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 PPME1Q9Y570 386 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 CYP46A1Q9Y6A2 500 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 CNTNAP2Q9UHC6 1331 aa14.36□□□□□ -0.11
NEK4P3-201ENST00000604859 ASAP2O43150 1006 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 POMCP01189 267 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 RFC5P40937 340 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 NBL1P41271 181 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 LAMTOR4Q0VGL1 99 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 TDGQ13569 410 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 UBXN11Q5T124 520 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 C15orf39Q6ZRI6 1047 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 CCDC149Q6ZUS6 474 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 OTUD6AQ7L8S5 288 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 ASCL5Q7RTU5 278 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 TCP11Q8WWU5 503 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 LARP6Q9BRS8 491 aaKnown RBP14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 WRAP73Q9P2S5 460 aaPredicted RBP14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 KCNJ14Q9UNX9 436 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 SSX2IPQ9Y2D8 614 aa14.35□□□□□ -0.11
NEK4P3-201ENST00000604859 GAS2O43903 313 aaKnown RBP14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 SOD2P04179 222 aa14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 GCFC2P16383 781 aaKnown RBP14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 NCLP19338 710 aaKnown RBP14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 YWHABP31946 246 aaKnown RBP14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 STK3Q13188 491 aa14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 EPHA7Q15375 998 aa14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 C4orf19Q8IY42 314 aa14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 CNNM3Q8NE01 707 aa14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 FLCNQ8NFG4 579 aa14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 PHF20Q9BVI0 1012 aa14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 KCNK12Q9HB15 430 aa14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 MTCL1Q9Y4B5 1905 aaKnown RBP14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 RIF1Q5UIP0 2472 aaKnown RBP14.34□□□□□ -0.11
NEK4P3-201ENST00000604859 TDRD15B5MCY1 1934 aaKnown RBP14.33□□□□□ -0.11
NEK4P3-201ENST00000604859 VPS13AQ96RL7 3174 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 CCDC194A0A1B0GVG4 234 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 C2CD2LO14523 706 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 TBX3O15119 743 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 EPB41L2O43491 1005 aaKnown RBP14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 MARCH6O60337 910 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 CCNT1O60563 726 aaKnown RBP14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 ITGA4P13612 1032 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 NPR3P17342 541 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 OR1G1P47890 313 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 AK2P54819 239 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 PCBP1Q15365 356 aaKnown RBP eCLIP14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 TAS1R1Q7RTX1 841 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 NEK8Q86SG6 692 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 FERMT3Q86UX7 667 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 COLGALT2Q8IYK4 626 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 RNF149Q8NC42 400 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 SMG8Q8ND04 991 aaKnown RBP14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 CMASQ8NFW8 434 aaPredicted RBP14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 HAS1Q92839 578 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 RPS6KC1Q96S38 1066 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 LXNQ9BS40 222 aa14.33□□□□□ -0.12
NEK4P3-201ENST00000604859 TM6SF1Q9BZW5 370 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms