RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 B4GALT5O43286 388 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 PRPF40AO75400 957 aaKnown RBP17.15■□□□□ 0.34
CDCA3-211ENST00000603043 PRKCBP05771 671 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 GAP43P17677 238 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 AXLP30530 894 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 HOXA11P31270 313 aaPredicted RBP17.15■□□□□ 0.34
CDCA3-211ENST00000603043 NCKAP1LP55160 1127 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 TWF2Q6IBS0 349 aaKnown RBP17.15■□□□□ 0.34
CDCA3-211ENST00000603043 FAM109BQ6ICB4 259 aaPredicted RBP17.15■□□□□ 0.34
CDCA3-211ENST00000603043 CNNM4Q6P4Q7 775 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 KRBA2Q6ZNG9 492 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 TMCO2Q7Z6W1 182 aaPredicted RBP17.15■□□□□ 0.34
CDCA3-211ENST00000603043 SFR1Q86XK3 245 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 TMEM161BQ8NDZ6 487 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 BLZF1Q9H2G9 400 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 TMEM134Q9H6X4 195 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 PANK4Q9NVE7 773 aa17.15■□□□□ 0.34
CDCA3-211ENST00000603043 K7ENM7 598 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 ACKR2O00590 384 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 ARF4P18085 180 aaPredicted RBP17.14■□□□□ 0.33
CDCA3-211ENST00000603043 CASP1P29466 404 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 UBE2HP62256 183 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 PRPF4BQ13523 1007 aaKnown RBP17.14■□□□□ 0.33
CDCA3-211ENST00000603043 SNW1Q13573 536 aaKnown RBP17.14■□□□□ 0.33
CDCA3-211ENST00000603043 LRIT3Q3SXY7 679 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 NOTUMQ6P988 496 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 CCDC65Q8IXS2 484 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 ENGASEQ8NFI3 743 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 CPB2Q96IY4 423 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 SEL1LQ9UBV2 794 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 CNTNAP2Q9UHC6 1331 aa17.14■□□□□ 0.33
CDCA3-211ENST00000603043 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.13■□□□□ 0.33
CDCA3-211ENST00000603043 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.13■□□□□ 0.33
CDCA3-211ENST00000603043 C9IYK1 514 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 MAPTP10636 758 aaKnown RBP17.13■□□□□ 0.33
CDCA3-211ENST00000603043 IBSPP21815 317 aaPredicted RBP17.13■□□□□ 0.33
CDCA3-211ENST00000603043 SARSP49591 514 aaKnown RBP17.13■□□□□ 0.33
CDCA3-211ENST00000603043 CUL4BQ13620 913 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 HERC4Q5GLZ8 1057 aaPredicted RBP17.13■□□□□ 0.33
CDCA3-211ENST00000603043 HAUS6Q7Z4H7 955 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 HERC6Q8IVU3 1022 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 TOP1MTQ969P6 601 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 CCDC34Q96HJ3 373 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 FIZ1Q96SL8 496 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 GRXCR1A8MXD5 290 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 UPP2O95045 317 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 SCP2P22307 547 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 STRN3Q13033 797 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 COASYQ13057 564 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 TMEM132AQ24JP5 1023 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 FAM117BQ6P1L5 589 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 TAS1R3Q7RTX0 852 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 SLC17A8Q8NDX2 589 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 MRPL44Q9H9J2 332 aaKnown RBP17.13■□□□□ 0.33
CDCA3-211ENST00000603043 OLFML3Q9NRN5 406 aa17.13■□□□□ 0.33
CDCA3-211ENST00000603043 A0A0U1RQF3 1178 aa17.12■□□□□ 0.33
CDCA3-211ENST00000603043 TTLL13PA6NNM8 815 aa17.12■□□□□ 0.33
CDCA3-211ENST00000603043 NR1I2O75469 434 aa17.12■□□□□ 0.33
CDCA3-211ENST00000603043 GJB5O95377 273 aa17.12■□□□□ 0.33
CDCA3-211ENST00000603043 EDN1P05305 212 aa17.12■□□□□ 0.33
CDCA3-211ENST00000603043 MYL1P05976 194 aa17.12■□□□□ 0.33
CDCA3-211ENST00000603043 NMT1P30419 496 aaKnown RBP17.12■□□□□ 0.33
CDCA3-211ENST00000603043 CCDC51Q96ER9 411 aa17.12■□□□□ 0.33
CDCA3-211ENST00000603043 ZBED2Q9BTP6 218 aa17.12■□□□□ 0.33
CDCA3-211ENST00000603043 TBC1D7Q9P0N9 293 aa17.12■□□□□ 0.33
CDCA3-211ENST00000603043 A0A1B0GUA9 196 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 KANK3Q6NY19 840 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 UNC13DQ70J99 1090 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 NPAS4Q8IUM7 802 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 KCNN1Q92952 543 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 MRPL4Q9BYD3 311 aaKnown RBP17.11■□□□□ 0.33
CDCA3-211ENST00000603043 FAM105AQ9NUU6 356 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
CDCA3-211ENST00000603043 LRFN2Q9ULH4 789 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 USP20Q9Y2K6 914 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 PVALEFA0A1B0GWK0 134 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 GTPBP6O43824 516 aaPredicted RBP17.11■□□□□ 0.33
CDCA3-211ENST00000603043 STAG3L1P0CL83 205 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 ABCD1P33897 745 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 RAB27AP51159 221 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 RABGGTBP53611 331 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 FAM189BP81408 668 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 SMAD3P84022 425 aaKnown RBP17.11■□□□□ 0.33
CDCA3-211ENST00000603043 HABP4Q5JVS0 413 aaKnown RBP17.11■□□□□ 0.33
CDCA3-211ENST00000603043 SLC27A1Q6PCB7 646 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 ZNF720Q7Z2F6 126 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 CDR2LQ86X02 465 aaPredicted RBP17.11■□□□□ 0.33
CDCA3-211ENST00000603043 ECHDC2Q86YB7 292 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 CRIPAKQ8N1N5 446 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 ST6GALNAC4Q9H4F1 302 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 TMEM161AQ9NX61 479 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 PCDHB7Q9Y5E2 793 aa17.11■□□□□ 0.33
CDCA3-211ENST00000603043 FNDC1Q4ZHG4 1894 aaPredicted RBP17.1■□□□□ 0.33
CDCA3-211ENST00000603043 N4BP3O15049 544 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 TLL1O43897 1013 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 PRR29P0C7W0 189 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 SKIP12755 728 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 GTF2BQ00403 316 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 ZC2HC1CQ53FD0 456 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms