RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 COG5Q9UP83 839 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 PHLPP2Q6ZVD8 1323 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 FAM86C2PA6NEL3 165 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 H0YCG3 227 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 TRAK2O60296 914 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 NBNO60934 754 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 RHOBTB3O94955 611 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 FAM13AO94988 1023 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 GLRA2P23416 452 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 ASIC1P78348 528 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 LAMTOR4Q0VGL1 99 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 PSMD2Q13200 908 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 DMP1Q13316 513 aaPredicted RBP12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 DRP2Q13474 957 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 TFDP1Q14186 410 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 MBTPS1Q14703 1052 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 PCBP1Q15365 356 aaKnown RBP eCLIP12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 AAK1Q2M2I8 961 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 CDCA2Q69YH5 1023 aaPredicted RBP12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 RUFY4Q6ZNE9 571 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 DYMQ7RTS9 669 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 GRAMD1CQ8IYS0 662 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 LRRC71Q8N4P6 559 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 CCDC155Q8N6L0 562 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 TRIML1Q8N9V2 468 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 PRPF31Q8WWY3 499 aaKnown RBP12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 STAMQ92783 540 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 CCDC47Q96A33 483 aaKnown RBP12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 TMEM143Q96AN5 459 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 IFT74Q96LB3 600 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 FIZ1Q96SL8 496 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 BLZF1Q9H2G9 400 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 GPRC5CQ9NQ84 441 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 RMND1Q9NWS8 449 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 SQORQ9Y6N5 450 aa12.85□□□□□ -0.35
CHMP2A-207ENST00000600804 USP34Q70CQ2 3546 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 NPHP3-ACAD11A0A0J9YXS1 232 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 RSPH10B2B2RC85 870 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 GPR32O75388 356 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 BAIAP3O94812 1187 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 PARNO95453 639 aaKnown RBP12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 CXCL10P02778 98 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 RPN1P04843 607 aaKnown RBP12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 RSPH10BP0C881 870 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 GPC3P51654 580 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 SMTNP53814 917 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 COASYQ13057 564 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 BFSP2Q13515 415 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 PNOCQ13519 176 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 ALCAMQ13740 583 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 ASAP3Q8TDY4 903 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 HLA-CQ95604 372 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 SMARCE1Q969G3 411 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 ADAMTS10Q9H324 1103 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 PANK4Q9NVE7 773 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 ARHGAP28Q9P2N2 729 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 AKT3Q9Y243 479 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 PCDHA5Q9Y5H7 936 aa12.84□□□□□ -0.35
CHMP2A-207ENST00000600804 LETM1O95202 739 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 IDEP14735 1019 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 CASP1P29466 404 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 NPTX2P47972 431 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 EFNA5P52803 228 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 CRYBB1P53674 252 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 NCKAP1LP55160 1127 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 PTENP60484 403 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 MRPS6P82932 125 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 MGAT3Q09327 533 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 CAPSQ13938 189 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 HERC4Q5GLZ8 1057 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 FAM26FQ5R3K3 315 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 ODR4Q5SWX8 454 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 LRRC8DQ7L1W4 858 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 RHPN2Q8IUC4 686 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 MYCT1Q8N699 235 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 BSNDQ8WZ55 320 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 HVCN1Q96D96 273 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 ZBTB10Q96DT7 871 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 C2orf40Q9H1Z8 148 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 TMEM134Q9H6X4 195 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 MTUS1Q9ULD2 1270 aa12.83□□□□□ -0.36
CHMP2A-207ENST00000600804 LINC01553A4QN01 128 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 PPP1R37O75864 691 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 GJB5O95377 273 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 VTNP04004 478 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 CKBP12277 381 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 SELPP16109 830 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 PHKA2P46019 1235 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 PEX3P56589 373 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 NLRP11P59045 1033 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 GTF2BQ00403 316 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 RAD51AP2Q09MP3 1159 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 CAMK4Q16566 473 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms