RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CCSER1Q9C0I3 900 aa17.91■□□□□ 0.46
LSM4-206ENST00000600289 C2orf40Q9H1Z8 148 aa17.91■□□□□ 0.46
LSM4-206ENST00000600289 RNF19AQ9NV58 838 aa17.91■□□□□ 0.46
LSM4-206ENST00000600289 TDRD15B5MCY1 1934 aaKnown RBP17.9■□□□□ 0.46
LSM4-206ENST00000600289 DCHS1Q96JQ0 3298 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 H3BNC9 293 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 TSPAN1O60635 241 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 F13A1P00488 732 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 GUCY2CP25092 1073 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 HOXA11P31270 313 aaPredicted RBP17.9■□□□□ 0.46
LSM4-206ENST00000600289 FAM187BQ17R55 369 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 TWF2Q6IBS0 349 aaKnown RBP17.9■□□□□ 0.46
LSM4-206ENST00000600289 RINT1Q6NUQ1 792 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 C1orf186Q6ZWK4 172 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 BSNDQ8WZ55 320 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 CALML4Q96GE6 196 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 PLVAPQ9BX97 442 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 TMEM117Q9H0C3 514 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 C17orf75Q9HAS0 396 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 FAM105AQ9NUU6 356 aa17.9■□□□□ 0.46
LSM4-206ENST00000600289 MRPL42Q9Y6G3 142 aaKnown RBP17.9■□□□□ 0.46
LSM4-206ENST00000600289 INO80B-WBP1J3KQ70 363 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 ERLIN2O94905 339 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 IL9P15248 144 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 BMPR1AP36894 532 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 SLC12A3P55017 1021 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 NAALADL2Q58DX5 795 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 NOTUMQ6P988 496 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 MAEAQ7L5Y9 396 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 ZBTB8OSQ8IWT0 167 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 P2RX5Q93086 422 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 DRC1Q96MC2 740 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 ZNF396Q96N95 335 aaPredicted RBP17.89■□□□□ 0.45
LSM4-206ENST00000600289 FZD8Q9H461 694 aa17.89■□□□□ 0.45
LSM4-206ENST00000600289 PRMT7Q9NVM4 692 aaPredicted RBP17.89■□□□□ 0.45
LSM4-206ENST00000600289 KMT2EQ8IZD2 1858 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 LRRIQ4A6NIV6 560 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 YEATS4O95619 227 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 FGFR1P11362 822 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 GATMP50440 423 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 NCBP1Q09161 790 aaKnown RBP17.88■□□□□ 0.45
LSM4-206ENST00000600289 MAPK7Q13164 816 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 UBXN11Q5T124 520 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 ATL3Q6DD88 541 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 MRPL10Q7Z7H8 261 aaKnown RBP17.88■□□□□ 0.45
LSM4-206ENST00000600289 DAW1Q8N136 415 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 LINC00301Q8NCQ3 95 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 CNNM3Q8NE01 707 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.88■□□□□ 0.45
LSM4-206ENST00000600289 GDPD5Q8WTR4 605 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 IFT74Q96LB3 600 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 CASD1Q96PB1 797 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 C11orf84Q9BUA3 381 aaPredicted RBP17.88■□□□□ 0.45
LSM4-206ENST00000600289 RUSC1Q9BVN2 902 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 CCDC113Q9H0I3 377 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 CSRNP2Q9H175 543 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 MTUS1Q9ULD2 1270 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 PHLPP2Q6ZVD8 1323 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 CNTNAP2Q9UHC6 1331 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 MYO15AQ9UKN7 3530 aa17.88■□□□□ 0.45
LSM4-206ENST00000600289 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.87■□□□□ 0.45
LSM4-206ENST00000600289 TBKBP1A7MCY6 615 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 PPP6R2O75170 966 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 PLA2G4BP0C869 781 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 ARF4P18085 180 aaPredicted RBP17.87■□□□□ 0.45
LSM4-206ENST00000600289 MARCKSP29966 332 aaPredicted RBP17.87■□□□□ 0.45
LSM4-206ENST00000600289 SSTR3P32745 418 aaPredicted RBP17.87■□□□□ 0.45
LSM4-206ENST00000600289 CTNNB1P35222 781 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 EFNA5P52803 228 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 ZRSR1Q15695 479 aaKnown RBP17.87■□□□□ 0.45
LSM4-206ENST00000600289 LEXMQ3ZCV2 418 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 PAN2Q504Q3 1202 aaKnown RBP17.87■□□□□ 0.45
LSM4-206ENST00000600289 CLLU1OSQ5K130 101 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 HFE2Q6ZVN8 426 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 LRRC43Q8N309 656 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 KRI1Q8N9T8 703 aaKnown RBP17.87■□□□□ 0.45
LSM4-206ENST00000600289 LRRC15Q8TF66 581 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 PGBD4Q96DM1 585 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 MRPL9Q9BYD2 267 aaKnown RBP17.87■□□□□ 0.45
LSM4-206ENST00000600289 LMAN2LQ9H0V9 348 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 UBE2ZQ9H832 354 aaPredicted RBP17.87■□□□□ 0.45
LSM4-206ENST00000600289 BLOC1S4Q9NUP1 217 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 PCDHB2Q9Y5E7 798 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 ZMYM2Q9UBW7 1377 aa17.87■□□□□ 0.45
LSM4-206ENST00000600289 A0A1B0GUA9 196 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 DCXO43602 365 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 HIP1RO75146 1068 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 PLCG1P19174 1290 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 NCLP19338 710 aaKnown RBP17.86■□□□□ 0.45
LSM4-206ENST00000600289 CEBPZQ03701 1054 aaKnown RBP17.86■□□□□ 0.45
LSM4-206ENST00000600289 GPM6BQ13491 265 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 PKP1Q13835 747 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 BECN1Q14457 450 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 KARSQ15046 597 aaKnown RBP17.86■□□□□ 0.45
LSM4-206ENST00000600289 STK38Q15208 465 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 ABI1Q8IZP0 508 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 DEPTORQ8TB45 409 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 RAD54LQ92698 747 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 KCNN1Q92952 543 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 CWH43Q9H720 699 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms