RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 MINDY3Q9H8M7 445 aa20.87■□□□□ 0.93
PNKP-213ENST00000599543 SLITRK3O94933 977 aa20.86■□□□□ 0.93
PNKP-213ENST00000599543 HOXB8P17481 243 aaPredicted RBP20.86■□□□□ 0.93
PNKP-213ENST00000599543 MXD4Q14582 209 aaPredicted RBP20.86■□□□□ 0.93
PNKP-213ENST00000599543 TMEM173Q86WV6 379 aaPredicted RBP20.86■□□□□ 0.93
PNKP-213ENST00000599543 TMEM87AQ8NBN3 555 aa20.86■□□□□ 0.93
PNKP-213ENST00000599543 IGSF21Q96ID5 467 aa20.86■□□□□ 0.93
PNKP-213ENST00000599543 APOL5Q9BWW9 433 aa20.86■□□□□ 0.93
PNKP-213ENST00000599543 S1PR5Q9H228 398 aa20.86■□□□□ 0.93
PNKP-213ENST00000599543 NRDE2Q9H7Z3 1164 aa20.86■□□□□ 0.93
PNKP-213ENST00000599543 RSAD1Q9HA92 442 aa20.86■□□□□ 0.93
PNKP-213ENST00000599543 HCFC2Q9Y5Z7 792 aa20.86■□□□□ 0.93
PNKP-213ENST00000599543 CNTNAP2Q9UHC6 1331 aa20.85■□□□□ 0.93
PNKP-213ENST00000599543 TDRD15B5MCY1 1934 aaKnown RBP20.85■□□□□ 0.93
PNKP-213ENST00000599543 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.85■□□□□ 0.93
PNKP-213ENST00000599543 HOXA11P31270 313 aaPredicted RBP20.85■□□□□ 0.93
PNKP-213ENST00000599543 TXKP42681 527 aa20.85■□□□□ 0.93
PNKP-213ENST00000599543 TFDP1Q14186 410 aa20.85■□□□□ 0.93
PNKP-213ENST00000599543 PCBP1Q15365 356 aaKnown RBP eCLIP20.85■□□□□ 0.93
PNKP-213ENST00000599543 TPRNQ4KMQ1 711 aa20.85■□□□□ 0.93
PNKP-213ENST00000599543 SYCE2Q6PIF2 218 aa20.85■□□□□ 0.93
PNKP-213ENST00000599543 EDAQ92838 391 aa20.85■□□□□ 0.93
PNKP-213ENST00000599543 TMX3Q96JJ7 454 aa20.85■□□□□ 0.93
PNKP-213ENST00000599543 HSD17B14Q9BPX1 270 aa20.85■□□□□ 0.93
PNKP-213ENST00000599543 ZBP1Q9H171 429 aa20.85■□□□□ 0.93
PNKP-213ENST00000599543 SH2B1Q9NRF2 756 aaPredicted RBP20.85■□□□□ 0.93
PNKP-213ENST00000599543 CLASP2O75122 1294 aaKnown RBP20.84■□□□□ 0.93
PNKP-213ENST00000599543 DGAT1O75907 488 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 LYPLA2O95372 231 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 CXCL14O95715 111 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 GALTP07902 379 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 GUCY1B3Q02153 619 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 NCBP1Q09161 790 aaKnown RBP20.84■□□□□ 0.93
PNKP-213ENST00000599543 GIT2Q14161 759 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 SAFBQ15424 915 aaKnown RBP eCLIP20.84■□□□□ 0.93
PNKP-213ENST00000599543 AGMOQ6ZNB7 445 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 HFE2Q6ZVN8 426 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 MRPL10Q7Z7H8 261 aaKnown RBP20.84■□□□□ 0.93
PNKP-213ENST00000599543 DDX53Q86TM3 631 aaKnown RBP20.84■□□□□ 0.93
PNKP-213ENST00000599543 XPNPEP1Q9NQW7 623 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 ANKEF1Q9NU02 776 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 KANSL3Q9P2N6 904 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 DNAJB4Q9UDY4 337 aa20.84■□□□□ 0.93
PNKP-213ENST00000599543 PIEZO1Q92508 2521 aa20.83■□□□□ 0.93
PNKP-213ENST00000599543 WNT7AO00755 349 aa20.83■□□□□ 0.93
PNKP-213ENST00000599543 SLC11A1P49279 550 aa20.83■□□□□ 0.93
PNKP-213ENST00000599543 UBXN11Q5T124 520 aa20.83■□□□□ 0.93
PNKP-213ENST00000599543 CES5AQ6NT32 575 aa20.83■□□□□ 0.93
PNKP-213ENST00000599543 NOTUMQ6P988 496 aa20.83■□□□□ 0.93
PNKP-213ENST00000599543 AUTS2Q8WXX7 1259 aa20.83■□□□□ 0.93
PNKP-213ENST00000599543 MFSD14AQ96MC6 490 aa20.83■□□□□ 0.93
PNKP-213ENST00000599543 FAM193BQ96PV7 902 aaPredicted RBP20.83■□□□□ 0.93
PNKP-213ENST00000599543 POTEMA6NI47 508 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 INO80B-WBP1J3KQ70 363 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 TSPAN1O60635 241 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 CTSAP10619 480 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 NCLP19338 710 aaKnown RBP20.82■□□□□ 0.92
PNKP-213ENST00000599543 AXLP30530 894 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 RARRES1P49788 294 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 PTENP60484 403 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 ITIH3Q06033 890 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 ZNF280BQ86YH2 543 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 CNNM3Q8NE01 707 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 BCL7CQ8WUZ0 217 aaPredicted RBP20.82■□□□□ 0.92
PNKP-213ENST00000599543 CCDC51Q96ER9 411 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 MTMR9Q96QG7 549 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 UBN1Q9NPG3 1134 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 STK39Q9UEW8 545 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 IRAK3Q9Y616 596 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 ZDBF2Q9HCK1 2354 aa20.82■□□□□ 0.92
PNKP-213ENST00000599543 POMCP01189 267 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 ITGA4P13612 1032 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 ATP2B1P20020 1258 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 SP100P23497 879 aaPredicted RBP20.81■□□□□ 0.92
PNKP-213ENST00000599543 MCM7P33993 719 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 ZXDAP98168 799 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 CAPSQ13938 189 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 TRIM67Q6ZTA4 783 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 PIGOQ8TEQ8 1089 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 NECTIN4Q96NY8 510 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 TMEM175Q9BSA9 504 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 ADAM7Q9H2U9 754 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 TSHZ2Q9NRE2 1034 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 DZANK1Q9NVP4 752 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 IPPQ9Y573 584 aa20.81■□□□□ 0.92
PNKP-213ENST00000599543 B4GALT3O60512 393 aa20.8■□□□□ 0.92
PNKP-213ENST00000599543 DDHD2O94830 711 aa20.8■□□□□ 0.92
PNKP-213ENST00000599543 AFF1P51825 1210 aaKnown RBP20.8■□□□□ 0.92
PNKP-213ENST00000599543 MBTD1Q05BQ5 628 aa20.8■□□□□ 0.92
PNKP-213ENST00000599543 POU5F1BQ06416 359 aa20.8■□□□□ 0.92
PNKP-213ENST00000599543 IFNLR1Q8IU57 520 aaPredicted RBP20.8■□□□□ 0.92
PNKP-213ENST00000599543 SMG8Q8ND04 991 aaKnown RBP20.8■□□□□ 0.92
PNKP-213ENST00000599543 ASAP3Q8TDY4 903 aa20.8■□□□□ 0.92
PNKP-213ENST00000599543 CPB2Q96IY4 423 aa20.8■□□□□ 0.92
PNKP-213ENST00000599543 C8orf76Q96K31 380 aa20.8■□□□□ 0.92
PNKP-213ENST00000599543 EIF2AQ9BY44 585 aaKnown RBP20.8■□□□□ 0.92
PNKP-213ENST00000599543 TRIM6Q9C030 488 aaPredicted RBP20.8■□□□□ 0.92
PNKP-213ENST00000599543 TMEM60Q9H2L4 133 aa20.8■□□□□ 0.92
PNKP-213ENST00000599543 FAN1Q9Y2M0 1017 aa20.8■□□□□ 0.92
PNKP-213ENST00000599543 NR2E1Q9Y466 385 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms