RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 EML1O00423 815 aa23.67■■□□□ 1.38
PNKP-212ENST00000599454 GALR2O43603 387 aaPredicted RBP23.67■■□□□ 1.38
PNKP-212ENST00000599454 WEE2P0C1S8 567 aa23.67■■□□□ 1.38
PNKP-212ENST00000599454 AGMOQ6ZNB7 445 aa23.67■■□□□ 1.38
PNKP-212ENST00000599454 CEP170P1Q96L14 293 aa23.67■■□□□ 1.38
PNKP-212ENST00000599454 FAM193BQ96PV7 902 aaPredicted RBP23.67■■□□□ 1.38
PNKP-212ENST00000599454 NAP1L4Q99733 375 aaKnown RBP23.67■■□□□ 1.38
PNKP-212ENST00000599454 SLKQ9H2G2 1235 aaPredicted RBP23.67■■□□□ 1.38
PNKP-212ENST00000599454 RSAD1Q9HA92 442 aa23.67■■□□□ 1.38
PNKP-212ENST00000599454 RIF1Q5UIP0 2472 aaKnown RBP23.66■■□□□ 1.38
PNKP-212ENST00000599454 TBX3O15119 743 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 ASAP2O43150 1006 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 GFRA3O60609 400 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 CDKL5O76039 1030 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 ALDH2P05091 517 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 NPEPPSP55786 919 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 NEK8Q86SG6 692 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 GPR149Q86SP6 731 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 ZNF280BQ86YH2 543 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 C4orf19Q8IY42 314 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 CNNM3Q8NE01 707 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 TCP11Q8WWU5 503 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 ACSF2Q96CM8 615 aaPredicted RBP23.66■■□□□ 1.38
PNKP-212ENST00000599454 AIFM3Q96NN9 605 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 VN1R3Q9BXE9 311 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 UBN1Q9NPG3 1134 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 FAM86C1Q9NVL1 165 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 LIMD1Q9UGP4 676 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 FAM186AA6NE01 2351 aa23.66■■□□□ 1.38
PNKP-212ENST00000599454 XBP1P17861 261 aa23.65■■□□□ 1.38
PNKP-212ENST00000599454 PCBP1Q15365 356 aaKnown RBP eCLIP23.65■■□□□ 1.38
PNKP-212ENST00000599454 OTUD6AQ7L8S5 288 aa23.65■■□□□ 1.38
PNKP-212ENST00000599454 OTOP3Q7RTS5 596 aa23.65■■□□□ 1.38
PNKP-212ENST00000599454 PRPF31Q8WWY3 499 aaKnown RBP23.65■■□□□ 1.38
PNKP-212ENST00000599454 KLHL5Q96PQ7 755 aa23.65■■□□□ 1.38
PNKP-212ENST00000599454 PHF20Q9BVI0 1012 aa23.65■■□□□ 1.38
PNKP-212ENST00000599454 FAN1Q9Y2M0 1017 aa23.65■■□□□ 1.38
PNKP-212ENST00000599454 SPDYE4A6NLX3 237 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 ASGR2P07307 311 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 SRGAP2CP0DJJ0 459 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 CLCN4P51793 760 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 LAMTOR4Q0VGL1 99 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 STK3Q13188 491 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 EPHA7Q15375 998 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 KANK3Q6NY19 840 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 TMC5Q6UXY8 1006 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 CCDC149Q6ZUS6 474 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 MRPL17Q9NRX2 175 aaKnown RBP23.64■■□□□ 1.37
PNKP-212ENST00000599454 KCNJ14Q9UNX9 436 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 SSX2IPQ9Y2D8 614 aa23.64■■□□□ 1.37
PNKP-212ENST00000599454 STK36Q9NRP7 1315 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 PROB1E7EW31 1015 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 H0Y858 1186 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 B4GALT3O60512 393 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 LILRB3O75022 631 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 DDHD2O94830 711 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 NCLP19338 710 aaKnown RBP23.63■■□□□ 1.37
PNKP-212ENST00000599454 KLRC2P26717 231 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 HOXA11P31270 313 aaPredicted RBP23.63■■□□□ 1.37
PNKP-212ENST00000599454 YWHABP31946 246 aaKnown RBP23.63■■□□□ 1.37
PNKP-212ENST00000599454 UBXN11Q5T124 520 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 ASTLQ6HA08 431 aaPredicted RBP23.63■■□□□ 1.37
PNKP-212ENST00000599454 C15orf39Q6ZRI6 1047 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 TMEM143Q96AN5 459 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 LXNQ9BS40 222 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 MFSD1Q9H3U5 465 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 MINDY3Q9H8M7 445 aa23.63■■□□□ 1.37
PNKP-212ENST00000599454 MARCH6O60337 910 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 CNPP09543 421 aaKnown RBP23.62■■□□□ 1.37
PNKP-212ENST00000599454 AXLP30530 894 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 CLCN5P51795 746 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 EMC2Q15006 297 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 ELMSAN1Q6PJG2 1045 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 FERMT3Q86UX7 667 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 TMEM105Q8N8V8 129 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 ZNF579Q8NAF0 562 aaKnown RBP23.62■■□□□ 1.37
PNKP-212ENST00000599454 RNF149Q8NC42 400 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 CCDC51Q96ER9 411 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 SMOC2Q9H3U7 446 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 ZSWIM4Q9H7M6 989 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 PDRG1Q9NUG6 133 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 WRAP73Q9P2S5 460 aaPredicted RBP23.62■■□□□ 1.37
PNKP-212ENST00000599454 DOCK8Q8NF50 2099 aa23.62■■□□□ 1.37
PNKP-212ENST00000599454 NRP1O14786 923 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 INPPL1O15357 1258 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 CCNT1O60563 726 aaKnown RBP23.61■■□□□ 1.37
PNKP-212ENST00000599454 ERLIN2O94905 339 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 SOD2P04179 222 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 URODP06132 367 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 SLFN12Q8IYM2 578 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 CMASQ8NFW8 434 aaPredicted RBP23.61■■□□□ 1.37
PNKP-212ENST00000599454 HAS1Q92839 578 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 MTRQ99707 1265 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 LARP6Q9BRS8 491 aaKnown RBP23.61■■□□□ 1.37
PNKP-212ENST00000599454 HERC2P3Q9BVR0 1158 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 DPP7Q9UHL4 492 aa23.61■■□□□ 1.37
PNKP-212ENST00000599454 BAG4O95429 457 aaKnown RBP23.6■■□□□ 1.37
PNKP-212ENST00000599454 POMCP01189 267 aa23.6■■□□□ 1.37
PNKP-212ENST00000599454 SSBP05455 408 aaKnown RBP eCLIP23.6■■□□□ 1.37
PNKP-212ENST00000599454 ITGA4P13612 1032 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms