RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 NSUN3Q9H649 340 aaKnown RBP13.62□□□□□ -0.23
PDE4C-213ENST00000598111 ALG13Q9NP73 1137 aaKnown RBP13.62□□□□□ -0.23
PDE4C-213ENST00000598111 PLAGL2Q9UPG8 496 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 CLIC4Q9Y696 253 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 B4GALT5O43286 388 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 HIP1RO75146 1068 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 FGF18O76093 207 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 PRKCBP05771 671 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 TXLNAP40222 546 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 EFNA5P52803 228 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 UBE3AQ05086 875 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 GRIN1Q05586 938 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 PTPAQ15257 358 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 AMHR2Q16671 573 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 AAK1Q2M2I8 961 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 NOMO2Q5JPE7 1267 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 UBXN11Q5T124 520 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 POF1BQ8WVV4 589 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 ATXN2LQ8WWM7 1075 aaKnown RBP13.61□□□□□ -0.23
PDE4C-213ENST00000598111 PPP2R3CQ969Q6 453 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 KIFC3Q9BVG8 833 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 EIF2AQ9BY44 585 aaKnown RBP13.61□□□□□ -0.23
PDE4C-213ENST00000598111 CWH43Q9H720 699 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 RSAD1Q9HA92 442 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 COG5Q9UP83 839 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 IPPQ9Y573 584 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 MYO7AQ13402 2215 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 PHLPP2Q6ZVD8 1323 aa13.61□□□□□ -0.23
PDE4C-213ENST00000598111 CARNS1A5YM72 827 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 CCDC169A6NNP5 214 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 MEIS3P2A8K0S8 358 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 N4BP3O15049 544 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 ZC3H11AO75152 810 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDE4C-213ENST00000598111 NPTXRO95502 500 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 PLA2G4BP0C869 781 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 ITGA4P13612 1032 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
PDE4C-213ENST00000598111 MARCKSP29966 332 aaPredicted RBP13.6□□□□□ -0.23
PDE4C-213ENST00000598111 PEX3P56589 373 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 MRPS5P82675 430 aaKnown RBP13.6□□□□□ -0.23
PDE4C-213ENST00000598111 PRPF4BQ13523 1007 aaKnown RBP13.6□□□□□ -0.23
PDE4C-213ENST00000598111 STK38Q15208 465 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 FAM187BQ17R55 369 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 TCEAL5Q5H9L2 206 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
PDE4C-213ENST00000598111 RINT1Q6NUQ1 792 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 SLC27A1Q6PCB7 646 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 KCNT2Q6UVM3 1135 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 AGMOQ6ZNB7 445 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 LRRC55Q6ZSA7 311 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 C1orf186Q6ZWK4 172 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 SYT2Q8N9I0 419 aaPredicted RBP13.6□□□□□ -0.23
PDE4C-213ENST00000598111 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
PDE4C-213ENST00000598111 HLA-CQ95604 372 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 ZNF396Q96N95 335 aaPredicted RBP13.6□□□□□ -0.23
PDE4C-213ENST00000598111 USP28Q96RU2 1077 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 ADPGKQ9BRR6 497 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 APOL6Q9BWW8 343 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 KCND2Q9NZV8 630 aa13.6□□□□□ -0.23
PDE4C-213ENST00000598111 BRWD1Q9NSI6 2320 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 PLCG1P19174 1290 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 GUCY2CP25092 1073 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 PBX3P40426 434 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 ALDH7A1P49419 539 aaKnown RBP13.59□□□□□ -0.23
PDE4C-213ENST00000598111 RAD51AP2Q09MP3 1159 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 MAPK7Q13164 816 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 KARSQ15046 597 aaKnown RBP13.59□□□□□ -0.23
PDE4C-213ENST00000598111 TJAP1Q5JTD0 557 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 APBB1IPQ7Z5R6 666 aaPredicted RBP13.59□□□□□ -0.23
PDE4C-213ENST00000598111 MRPL10Q7Z7H8 261 aaKnown RBP13.59□□□□□ -0.23
PDE4C-213ENST00000598111 GPBP1Q86WP2 473 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 CDR2LQ86X02 465 aaPredicted RBP13.59□□□□□ -0.23
PDE4C-213ENST00000598111 SPPL3Q8TCT6 385 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 CCDC113Q9H0I3 377 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 GBP3Q9H0R5 595 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 FZD8Q9H461 694 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 NXF3Q9H4D5 531 aaKnown RBP13.59□□□□□ -0.23
PDE4C-213ENST00000598111 C17orf75Q9HAS0 396 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 POLD4Q9HCU8 107 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 UBN1Q9NPG3 1134 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 KMT5AQ9NQR1 393 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 TLR9Q9NR96 1032 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 TBC1D13Q9NVG8 400 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 SPG21Q9NZD8 308 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 PUF60Q9UHX1 559 aaKnown RBP13.59□□□□□ -0.23
PDE4C-213ENST00000598111 FBXO2Q9UK22 296 aaPredicted RBP13.59□□□□□ -0.23
PDE4C-213ENST00000598111 HES2Q9Y543 173 aa13.59□□□□□ -0.23
PDE4C-213ENST00000598111 EYSQ5T1H1 3165 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 A0A1B0GUA9 196 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 ACKR2O00590 384 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 OFD1O75665 1012 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 KRT18P05783 430 aaKnown RBP13.58□□□□□ -0.24
PDE4C-213ENST00000598111 ZSCAN22P10073 491 aaPredicted RBP13.58□□□□□ -0.24
PDE4C-213ENST00000598111 DNAJB1P25685 340 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 MLH1P40692 756 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 NPTX2P47972 431 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 SLC12A3P55017 1021 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 BCAR1P56945 870 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms