RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 LONRF3Q496Y0 759 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 NPAS4Q8IUM7 802 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 SLC17A8Q8NDX2 589 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 STAMQ92783 540 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 FIZ1Q96SL8 496 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 PCDHA11Q9Y5I1 949 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 CNTNAP2Q9UHC6 1331 aa22.39■■□□□ 1.18
PNKP-211ENST00000598020 A0A1B0GUA9 196 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 TRAK2O60296 914 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 ZNF623O75123 536 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 PRKCBP05771 671 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 STAG3L1P0CL83 205 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 ARF4P18085 180 aaPredicted RBP22.39■■□□□ 1.17
PNKP-211ENST00000598020 ABCD1P33897 745 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 RAB27AP51159 221 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 HTRA4P83105 476 aaPredicted RBP22.39■■□□□ 1.17
PNKP-211ENST00000598020 RAB30Q15771 203 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 TWF2Q6IBS0 349 aaKnown RBP22.39■■□□□ 1.17
PNKP-211ENST00000598020 NOTUMQ6P988 496 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 PAGE5Q96GU1 130 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 ST6GALNAC4Q9H4F1 302 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 TMEM161AQ9NX61 479 aa22.39■■□□□ 1.17
PNKP-211ENST00000598020 B4GALT5O43286 388 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 ZNF202O95125 648 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 EOMESO95936 686 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 MYL1P05976 194 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 SKIP12755 728 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 PRPF4BQ13523 1007 aaKnown RBP22.38■■□□□ 1.17
PNKP-211ENST00000598020 UBXN11Q5T124 520 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 TAS1R3Q7RTX0 852 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 HAUS6Q7Z4H7 955 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 TMCO2Q7Z6W1 182 aaPredicted RBP22.38■■□□□ 1.17
PNKP-211ENST00000598020 ZNF598Q86UK7 904 aaKnown RBP22.38■■□□□ 1.17
PNKP-211ENST00000598020 ECHDC2Q86YB7 292 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 FMR1NBQ8N0W7 255 aaPredicted RBP22.38■■□□□ 1.17
PNKP-211ENST00000598020 ENGASEQ8NFI3 743 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 RAD9AQ99638 391 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 PBX4Q9BYU1 374 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 OLFML3Q9NRN5 406 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 GBF1Q92538 1859 aa22.38■■□□□ 1.17
PNKP-211ENST00000598020 LAMA3Q16787 3333 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 SOX1O00570 391 aaPredicted RBP22.37■■□□□ 1.17
PNKP-211ENST00000598020 FAM160A1Q05DH4 1040 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 SNW1Q13573 536 aaKnown RBP22.37■■□□□ 1.17
PNKP-211ENST00000598020 KRBA2Q6ZNG9 492 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 SFR1Q86XK3 245 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 FAM178BQ8IXR5 827 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 CCDC65Q8IXS2 484 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 ZHX3Q9H4I2 956 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 RC3H2Q9HBD1 1191 aaKnown RBP22.37■■□□□ 1.17
PNKP-211ENST00000598020 FAM105AQ9NUU6 356 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 PANK4Q9NVE7 773 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 MSRAQ9UJ68 235 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 INSL6Q9Y581 213 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 PCDHB7Q9Y5E2 793 aa22.37■■□□□ 1.17
PNKP-211ENST00000598020 PVALEFA0A1B0GWK0 134 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 TLL1O43897 1013 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 DGKIO75912 1065 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 UPP2O95045 317 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 EDN1P05305 212 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 IDEP14735 1019 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 RABGGTBP53611 331 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 GTF2BQ00403 316 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 NT5DC1Q5TFE4 455 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 GPR153Q6NV75 609 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 ZNF720Q7Z2F6 126 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 MRPL10Q7Z7H8 261 aaKnown RBP22.36■■□□□ 1.17
PNKP-211ENST00000598020 ZNF689Q96CS4 500 aaPredicted RBP22.36■■□□□ 1.17
PNKP-211ENST00000598020 CPB2Q96IY4 423 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 ZBED2Q9BTP6 218 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 LRFN2Q9ULH4 789 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 COL4A6Q14031 1691 aa22.36■■□□□ 1.17
PNKP-211ENST00000598020 TTLL13PA6NNM8 815 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 N4BP3O15049 544 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 ATF7P17544 494 aaPredicted RBP22.35■■□□□ 1.17
PNKP-211ENST00000598020 PBX2P40425 430 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 AFMP43652 599 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 ASIC1P78348 528 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 STRN3Q13033 797 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 TPRNQ4KMQ1 711 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 HERC4Q5GLZ8 1057 aaPredicted RBP22.35■■□□□ 1.17
PNKP-211ENST00000598020 KANK3Q6NY19 840 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 SLC27A1Q6PCB7 646 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 UNC13DQ70J99 1090 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 CNNM3Q8NE01 707 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 SP7Q8TDD2 431 aaPredicted RBP22.35■■□□□ 1.17
PNKP-211ENST00000598020 TIGD1Q96MW7 591 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 STRA6Q9BX79 667 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 MRPL4Q9BYD3 311 aaKnown RBP22.35■■□□□ 1.17
PNKP-211ENST00000598020 YBX2Q9Y2T7 364 aaKnown RBP22.35■■□□□ 1.17
PNKP-211ENST00000598020 PCDHB2Q9Y5E7 798 aa22.35■■□□□ 1.17
PNKP-211ENST00000598020 TMEM265A0A087WTH1 108 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 K7ENM7 598 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 GTPBP6O43824 516 aaPredicted RBP22.34■■□□□ 1.17
PNKP-211ENST00000598020 GADD45BO75293 160 aaPredicted RBP22.34■■□□□ 1.17
PNKP-211ENST00000598020 PPP1R37O75864 691 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 LIG1P18858 919 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 DNAJB2P25686 324 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 NMT1P30419 496 aaKnown RBP22.34■■□□□ 1.17
PNKP-211ENST00000598020 UBE2HP62256 183 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms