RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 AMHR2Q16671 573 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 RASIP1Q5U651 963 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 HAUS6Q7Z4H7 955 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 LINC01599Q8WXQ3 324 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 KCNN1Q92952 543 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 FIZ1Q96SL8 496 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 ADAM2Q99965 735 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 TSPYL2Q9H2G4 693 aaPredicted RBP15.81■□□□□ 0.12
VRK3-213ENST00000597215 MRPL44Q9H9J2 332 aaKnown RBP15.81■□□□□ 0.12
VRK3-213ENST00000597215 C1orf112Q9NSG2 853 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 DACT1Q9NYF0 836 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 SLC4A7Q9Y6M7 1214 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 CNTNAP2Q9UHC6 1331 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 A0A1W2PPC1 479 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 ACKR2O00590 384 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 ENPP3O14638 875 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 MGEA5O60502 916 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 AMHP03971 560 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 NMT1P30419 496 aaKnown RBP15.8■□□□□ 0.12
VRK3-213ENST00000597215 PRPF4BQ13523 1007 aaKnown RBP15.8■□□□□ 0.12
VRK3-213ENST00000597215 POSTNQ15063 836 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 TMEM132AQ24JP5 1023 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 TWF2Q6IBS0 349 aaKnown RBP15.8■□□□□ 0.12
VRK3-213ENST00000597215 NOTUMQ6P988 496 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 CCDC47Q96A33 483 aaKnown RBP15.8■□□□□ 0.12
VRK3-213ENST00000597215 CCDC51Q96ER9 411 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 ST6GALNAC4Q9H4F1 302 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 RGS18Q9NS28 235 aa15.8■□□□□ 0.12
VRK3-213ENST00000597215 CXXC1Q9P0U4 656 aaPredicted RBP15.8■□□□□ 0.12
VRK3-213ENST00000597215 RANBP2P49792 3224 aaKnown RBP15.79■□□□□ 0.12
VRK3-213ENST00000597215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.79■□□□□ 0.12
VRK3-213ENST00000597215 B4GALT5O43286 388 aa15.79■□□□□ 0.12
VRK3-213ENST00000597215 ARF4P18085 180 aaPredicted RBP15.79■□□□□ 0.12
VRK3-213ENST00000597215 HOXA11P31270 313 aaPredicted RBP15.79■□□□□ 0.12
VRK3-213ENST00000597215 ALCAMQ13740 583 aa15.79■□□□□ 0.12
VRK3-213ENST00000597215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.79■□□□□ 0.12
VRK3-213ENST00000597215 TAS1R3Q7RTX0 852 aa15.79■□□□□ 0.12
VRK3-213ENST00000597215 ZNF720Q7Z2F6 126 aa15.79■□□□□ 0.12
VRK3-213ENST00000597215 RTN4RL1Q86UN2 441 aaPredicted RBP15.79■□□□□ 0.12
VRK3-213ENST00000597215 ELOA2Q8IYF1 753 aaPredicted RBP15.79■□□□□ 0.12
VRK3-213ENST00000597215 HVCN1Q96D96 273 aa15.79■□□□□ 0.12
VRK3-213ENST00000597215 CPB2Q96IY4 423 aa15.79■□□□□ 0.12
VRK3-213ENST00000597215 SLC9A7Q96T83 725 aa15.79■□□□□ 0.12
VRK3-213ENST00000597215 MRPL4Q9BYD3 311 aaKnown RBP15.79■□□□□ 0.12
VRK3-213ENST00000597215 EXOC1Q9NV70 894 aa15.79■□□□□ 0.12
VRK3-213ENST00000597215 RNF216Q9NWF9 866 aaPredicted RBP15.79■□□□□ 0.12
VRK3-213ENST00000597215 TBC1D7Q9P0N9 293 aa15.79■□□□□ 0.12
VRK3-213ENST00000597215 COLQQ9Y215 455 aaPredicted RBP15.79■□□□□ 0.12
VRK3-213ENST00000597215 TTC3P53804 2025 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 C9IYK1 514 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 N4BP3O15049 544 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 KLRC4O43908 158 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 GCNT3O95395 438 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 RPN1P04843 607 aaKnown RBP15.78■□□□□ 0.12
VRK3-213ENST00000597215 SARSP49591 514 aaKnown RBP15.78■□□□□ 0.12
VRK3-213ENST00000597215 DEFB103AP81534 67 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 GTF2BQ00403 316 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 EHHADHQ08426 723 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 DPYDQ12882 1025 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 FAM26FQ5R3K3 315 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 STXBP4Q6ZWJ1 553 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 SLC24A5Q71RS6 500 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 MYOCDQ8IZQ8 938 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 PHOSPHO2Q8TCD6 241 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 TRAIPQ9BWF2 469 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 TBX20Q9UMR3 447 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 PCDHB13Q9Y5F0 798 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 PTPRSQ13332 1948 aa15.78■□□□□ 0.12
VRK3-213ENST00000597215 A0A1B0GUA9 196 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 PPP1R37O75864 691 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 SMC2O95347 1197 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 EDN1P05305 212 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 STAG3L1P0CL83 205 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 SKIP12755 728 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 ATP2A2P16615 1042 aaKnown RBP15.77■□□□□ 0.12
VRK3-213ENST00000597215 RAB27AP51159 221 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 PNOCQ13519 176 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 KMT5BQ4FZB7 885 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 NT5DC1Q5TFE4 455 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 ATF7IP2Q5U623 682 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 SLC27A1Q6PCB7 646 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 NPAS4Q8IUM7 802 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 MAP4K3Q8IVH8 894 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 BICD1Q96G01 975 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 ADPGKQ9BRR6 497 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 FAM105AQ9NUU6 356 aa15.77■□□□□ 0.12
VRK3-213ENST00000597215 A0A0U1RQF3 1178 aa15.76■□□□□ 0.11
VRK3-213ENST00000597215 TTLL13PA6NNM8 815 aa15.76■□□□□ 0.11
VRK3-213ENST00000597215 EIF3DO15371 548 aaKnown RBP eCLIP15.76■□□□□ 0.11
VRK3-213ENST00000597215 MYBP10242 640 aa15.76■□□□□ 0.11
VRK3-213ENST00000597215 MCM4P33991 863 aa15.76■□□□□ 0.11
VRK3-213ENST00000597215 CASP5P51878 434 aa15.76■□□□□ 0.11
VRK3-213ENST00000597215 FAM189BP81408 668 aa15.76■□□□□ 0.11
VRK3-213ENST00000597215 PSMD2Q13200 908 aa15.76■□□□□ 0.11
VRK3-213ENST00000597215 KCNB1Q14721 858 aa15.76■□□□□ 0.11
VRK3-213ENST00000597215 ZC2HC1CQ53FD0 456 aaPredicted RBP15.76■□□□□ 0.11
VRK3-213ENST00000597215 L1TD1Q5T7N2 865 aaKnown RBP15.76■□□□□ 0.11
VRK3-213ENST00000597215 ZPBP2Q6X784 338 aa15.76■□□□□ 0.11
VRK3-213ENST00000597215 APBB1IPQ7Z5R6 666 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms