RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 VSIG10LQ86VR7 867 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 SYCE1Q8N0S2 351 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 ZNF280CQ8ND82 737 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 TMEM161BQ8NDZ6 487 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 ELMO3Q96BJ8 720 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 CCDC127Q96BQ5 260 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 HES6Q96HZ4 224 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.58■■□□□ 1.534e-15■■■□□ 18
SRRM1-222ENST00000596378 MOV10L1Q9BXT6 1211 aaKnown RBP24.58■■□□□ 1.53
SRRM1-222ENST00000596378 ST6GALNAC4Q9H4F1 302 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 GABBR1Q9UBS5 961 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 COG5Q9UP83 839 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 ZNF862O60290 1169 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 CCDC172P0C7W6 258 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 MAP2K1Q02750 393 aaPredicted RBP24.57■■□□□ 1.52
SRRM1-222ENST00000596378 PAK2Q13177 524 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 ZNF746Q6NUN9 644 aaPredicted RBP24.57■■□□□ 1.52
SRRM1-222ENST00000596378 NLRX1Q86UT6 975 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 REPS2Q8NFH8 660 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 POP1Q99575 1024 aaKnown RBP24.57■■□□□ 1.52
SRRM1-222ENST00000596378 ACP6Q9NPH0 428 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 GINM1Q9NU53 330 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 TBX20Q9UMR3 447 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 RGS20O76081 388 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 CCND2P30279 289 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 MXI1P50539 228 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 ERVK-9P63128 1117 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 CETN1Q12798 172 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 GOLGA6L1Q8N7Z2 621 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 AMFRQ9UKV5 643 aa24.57■■□□□ 1.52
SRRM1-222ENST00000596378 ACTN2P35609 894 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 PPATQ06203 517 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 SNRNP35Q16560 246 aaKnown RBP24.56■■□□□ 1.52
SRRM1-222ENST00000596378 SAMD3Q8N6K7 520 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 ANKEF1Q9NU02 776 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 CHORDC1Q9UHD1 332 aaPredicted RBP24.56■■□□□ 1.52
SRRM1-222ENST00000596378 PCDHA10Q9Y5I2 948 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 PHIPQ8WWQ0 1821 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 DENND3A2RUS2 1198 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 KRIT1O00522 736 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 RFX1P22670 979 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 TMEM174Q8WUU8 243 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 SEMA4DQ92854 862 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 CEP170P1Q96L14 293 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 ZIM3Q96PE6 472 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 PICK1Q9NRD5 415 aa24.56■■□□□ 1.52
SRRM1-222ENST00000596378 TOPORSQ9NS56 1045 aaPredicted RBP24.56■■□□□ 1.52
SRRM1-222ENST00000596378 ZNF214Q9UL59 606 aaPredicted RBP24.56■■□□□ 1.52
SRRM1-222ENST00000596378 GOLGA6CA6NDK9 693 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 GOLGA6DP0CG33 693 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 DMP1Q13316 513 aaPredicted RBP24.55■■□□□ 1.52
SRRM1-222ENST00000596378 TMEM132BQ14DG7 1078 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 ANGEL2Q5VTE6 544 aaKnown RBP24.55■■□□□ 1.52
SRRM1-222ENST00000596378 DCAF12L1Q5VU92 463 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 TAF3Q5VWG9 929 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 DDX42Q86XP3 938 aaKnown RBP eCLIP24.55■■□□□ 1.52
SRRM1-222ENST00000596378 RPUSD2Q8IZ73 545 aaKnown RBP24.55■■□□□ 1.52
SRRM1-222ENST00000596378 TIPINQ9BVW5 301 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 GOLGA6AQ9NYA3 693 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 PFASO15067 1338 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 SART1O43290 800 aaKnown RBP24.55■■□□□ 1.52
SRRM1-222ENST00000596378 HSF2BPO75031 334 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 CNGA1P29973 690 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 DCAF15Q66K64 600 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 RASGEF1CQ8N431 466 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 ARL8AQ96BM9 186 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 FAM84AQ96KN4 292 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 SH3GL2Q99962 352 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 KMT5AQ9NQR1 393 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 CALCOCO1Q9P1Z2 691 aa24.55■■□□□ 1.52
SRRM1-222ENST00000596378 SGPL1O95470 568 aa24.54■■□□□ 1.52
SRRM1-222ENST00000596378 KCNA2P16389 499 aa24.54■■□□□ 1.52
SRRM1-222ENST00000596378 NAA35Q5VZE5 725 aa24.54■■□□□ 1.52
SRRM1-222ENST00000596378 SWSAP1Q6NVH7 229 aa24.54■■□□□ 1.52
SRRM1-222ENST00000596378 PPM1KQ8N3J5 372 aa24.54■■□□□ 1.52
SRRM1-222ENST00000596378 ADGRA3Q8IWK6 1321 aa24.54■■□□□ 1.52
SRRM1-222ENST00000596378 ANKRD62A6NC57 917 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 P4HA2O15460 535 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 DDX3YO15523 660 aaKnown RBP24.53■■□□□ 1.52
SRRM1-222ENST00000596378 SMTNP53814 917 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 NNTQ13423 1086 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 SLC39A4Q6P5W5 647 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 LEKR1Q6ZMV7 388 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 MAP4K3Q8IVH8 894 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 GPRASP2Q96D09 838 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 KREMEN1Q96MU8 473 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 ZNF541Q9H0D2 1346 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 FTLP02792 175 aaPredicted RBP24.53■■□□□ 1.52
SRRM1-222ENST00000596378 DSG3P32926 999 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 TTMPQ5BVD1 217 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 FMNL3Q8IVF7 1028 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 FAM76AQ8TAV0 307 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 IWS1Q96ST2 819 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 PCDHB18PQ96TA0 734 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 AS3MTQ9HBK9 375 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 AMACRQ9UHK6 382 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 ZNF112Q9UJU3 913 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 NR2E1Q9Y466 385 aa24.53■■□□□ 1.52
SRRM1-222ENST00000596378 STBD1O95210 358 aa24.52■■□□□ 1.52
SRRM1-222ENST00000596378 KRT14P02533 472 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms