RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 DNAJB2P25686 324 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 CST5P28325 142 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 HOXD13P35453 343 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 FANCCQ00597 558 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 LAMTOR4Q0VGL1 99 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 ADAM9Q13443 819 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 DRP2Q13474 957 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 HSP90AA4PQ58FG1 418 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 SARM1Q6SZW1 724 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 HS2ST1Q7LGA3 356 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 RHPN2Q8IUC4 686 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 ZBTB8OSQ8IWT0 167 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 TMEM161BQ8NDZ6 487 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 GOLGA5Q8TBA6 731 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 VTI1AQ96AJ9 217 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 RNPC3Q96LT9 517 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 NECAB3Q96P71 396 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 GBP3Q9H0R5 595 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 HSD3B7Q9H2F3 369 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 TMEM134Q9H6X4 195 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 TBX20Q9UMR3 447 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 TRAF3IP3Q9Y228 551 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 KCNJ18B7U540 433 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 AP5Z1O43299 807 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 CBFA2T2O43439 604 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 CABYRO75952 493 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 ZNF18P17022 549 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 DEKP35659 375 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 CLCN3P51790 818 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 SNRPFP62306 86 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 KCNA1Q09470 495 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 STRN3Q13033 797 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 KCNJ12Q14500 433 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 EDRF1Q3B7T1 1238 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 FILIP1LQ4L180 1135 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 MARCH8Q5T0T0 291 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 CDKAL1Q5VV42 579 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 NFRKBQ6P4R8 1299 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 FILIP1Q7Z7B0 1213 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 ALYREFQ86V81 257 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 ARRDC4Q8NCT1 418 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 ZBTB10Q96DT7 871 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 CEP63Q96MT8 703 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 MAP7D2Q96T17 732 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 LRFN3Q9BTN0 628 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 KIFC3Q9BVG8 833 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 C2orf40Q9H1Z8 148 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 CGNQ9P2M7 1197 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 HDAC6Q9UBN7 1215 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 AKT3Q9Y243 479 aa14.32□□□□□ -0.12
SHKBP1-209ENST00000595803 MUC6Q6W4X9 2439 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 KAT6AQ92794 2004 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 CHD9Q3L8U1 2897 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 CLIC2O15247 247 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 TGFB1I1O43294 461 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 GNA14O95837 355 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 TPM2P07951 284 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 CYP2C9P11712 490 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 ATP1A3P13637 1013 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 EFNA5P52803 228 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 UBASH3AP57075 661 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 CDC42EP1Q00587 391 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 CAPSQ13938 189 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 NBPF20Q3BBV1 942 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 ZCWPW2Q504Y3 356 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 TCP11X2Q5H9J9 407 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 RNF149Q8NC42 400 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 PPP1R13LQ8WUF5 828 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 LMBR1Q8WVP7 490 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 CTAGE1Q96RT6 745 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 GAS2L1Q99501 681 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 TSEN34Q9BSV6 310 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 ZNF576Q9H609 170 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 IFNKQ9P0W0 207 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 ARHGAP28Q9P2N2 729 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 LIMA1Q9UHB6 759 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 PHLPP2Q6ZVD8 1323 aa14.31□□□□□ -0.12
SHKBP1-209ENST00000595803 SMIM35A0A1B0GVV1 85 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 DNM1LO00429 736 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 NR3C1P04150 777 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 TPM3P06753 285 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 EEF1GP26641 437 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 MTIF2P46199 727 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 ZNF75DP51815 510 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 POU5F1BQ06416 359 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 MYBPC2Q14324 1141 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 NFIL3Q16649 462 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 CCDC40Q4G0X9 1142 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 FAM47CQ5HY64 1035 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 CCSAPQ6IQ19 270 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 LINC01465Q8N7H1 131 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 BICD1Q96G01 975 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 NLRP4Q96MN2 994 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 REV3LO60673 3130 aa14.3□□□□□ -0.12
SHKBP1-209ENST00000595803 MBLAC1A4D2B0 266 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 MOXD2PA6NHM9 499 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 TREHO43280 583 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 NR2F2P24468 414 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms