RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 SKIP12755 728 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 ARF4P18085 180 aaPredicted RBP15.82■□□□□ 0.12
LIG1-208ENST00000595758 SYKP43405 635 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 FXR1P51114 621 aaKnown RBP eCLIP15.82■□□□□ 0.12
LIG1-208ENST00000595758 NDUFA8P51970 172 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 PRPF4BQ13523 1007 aaKnown RBP15.82■□□□□ 0.12
LIG1-208ENST00000595758 NOTUMQ6P988 496 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 ECHDC2Q86YB7 292 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 CRIPAKQ8N1N5 446 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 TIFAQ96CG3 184 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 DNAJC19Q96DA6 116 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 CCDC51Q96ER9 411 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 CPB2Q96IY4 423 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 YME1L1Q96TA2 773 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 TRAIPQ9BWF2 469 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 TMEM134Q9H6X4 195 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 ELAC1Q9H777 363 aaKnown RBP15.82■□□□□ 0.12
LIG1-208ENST00000595758 TMEM161AQ9NX61 479 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 USP25Q9UHP3 1055 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 SERTAD1Q9UHV2 236 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 YBX2Q9Y2T7 364 aaKnown RBP15.82■□□□□ 0.12
LIG1-208ENST00000595758 PHLPP2Q6ZVD8 1323 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 H0YCG3 227 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 TRAK2O60296 914 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 IDEP14735 1019 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 GAP43P17677 238 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 HTRA4P83105 476 aaPredicted RBP15.81■□□□□ 0.12
LIG1-208ENST00000595758 TMEM132AQ24JP5 1023 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 LONRF3Q496Y0 759 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 RNF169Q8NCN4 708 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 TMEM161BQ8NDZ6 487 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 TRIM9Q9C026 710 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 NKX2-4Q9H2Z4 354 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 GOLPH3LQ9H4A5 285 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 CNTNAP2Q9UHC6 1331 aa15.81■□□□□ 0.12
LIG1-208ENST00000595758 A0A1B0GUA9 196 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 TTLL13PA6NNM8 815 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 ACTN4O43707 911 aaKnown RBP15.8■□□□□ 0.12
LIG1-208ENST00000595758 DGKIO75912 1065 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 EOMESO95936 686 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 CA3P07451 260 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 MAPTP10636 758 aaKnown RBP15.8■□□□□ 0.12
LIG1-208ENST00000595758 SCP2P22307 547 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 AFMP43652 599 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 RAB27AP51159 221 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 NCKAP1LP55160 1127 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 UBXN11Q5T124 520 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 NT5DC1Q5TFE4 455 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 GPR153Q6NV75 609 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 HAUS6Q7Z4H7 955 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 FAM178BQ8IXR5 827 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 CCDC65Q8IXS2 484 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 C7orf25Q9BPX7 421 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 SLC28A3Q9HAS3 691 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 FAM105AQ9NUU6 356 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 PANK4Q9NVE7 773 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 SEL1LQ9UBV2 794 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 USP20Q9Y2K6 914 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 PCDHB2Q9Y5E7 798 aa15.8■□□□□ 0.12
LIG1-208ENST00000595758 PTPRSQ13332 1948 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.79■□□□□ 0.12
LIG1-208ENST00000595758 LCHNA4D1U4 455 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 K7ENM7 598 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 N4BP3O15049 544 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 ZNF623O75123 536 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 ASIC1P78348 528 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 STRN3Q13033 797 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 HERC4Q5GLZ8 1057 aaPredicted RBP15.79■□□□□ 0.12
LIG1-208ENST00000595758 CNNM4Q6P4Q7 775 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 SLC27A1Q6PCB7 646 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 TAS1R3Q7RTX0 852 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 ZNF598Q86UK7 904 aaKnown RBP15.79■□□□□ 0.12
LIG1-208ENST00000595758 CDR2LQ86X02 465 aaPredicted RBP15.79■□□□□ 0.12
LIG1-208ENST00000595758 SFR1Q86XK3 245 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 SLC17A8Q8NDX2 589 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 PAGE5Q96GU1 130 aa15.79■□□□□ 0.12
LIG1-208ENST00000595758 EIF2AQ9BY44 585 aaKnown RBP15.79■□□□□ 0.12
LIG1-208ENST00000595758 MRPL4Q9BYD3 311 aaKnown RBP15.79■□□□□ 0.12
LIG1-208ENST00000595758 MYH11P35749 1972 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 TMEM265A0A087WTH1 108 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 FRMD3A2A2Y4 597 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 HOXA2O43364 376 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 ZNF202O95125 648 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 EDN1P05305 212 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 FGFR1P11362 822 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 ATF7P17544 494 aaPredicted RBP15.78■□□□□ 0.12
LIG1-208ENST00000595758 NMT1P30419 496 aaKnown RBP15.78■□□□□ 0.12
LIG1-208ENST00000595758 GATMP50440 423 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 BTG3Q14201 252 aaPredicted RBP15.78■□□□□ 0.12
LIG1-208ENST00000595758 ATF7IP2Q5U623 682 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 PPP2R2DQ66LE6 453 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 MRPL10Q7Z7H8 261 aaKnown RBP15.78■□□□□ 0.12
LIG1-208ENST00000595758 GRAMD1CQ8IYS0 662 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 TMEM87AQ8NBN3 555 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 CNNM3Q8NE01 707 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 SP7Q8TDD2 431 aaPredicted RBP15.78■□□□□ 0.12
LIG1-208ENST00000595758 KCNN1Q92952 543 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 ZNF689Q96CS4 500 aaPredicted RBP15.78■□□□□ 0.12
LIG1-208ENST00000595758 PGBD4Q96DM1 585 aa15.78■□□□□ 0.12
LIG1-208ENST00000595758 FIZ1Q96SL8 496 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms