RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PIN4Q9Y237 131 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 FAN1Q9Y2M0 1017 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 PCDHGA2Q9Y5H1 932 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 PCDHA10Q9Y5I2 948 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 ADAMTS3O15072 1205 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 GLUD1P00367 558 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 URODP06132 367 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 ADH1AP07327 375 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 ADCY7P51828 1080 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 COL9A2Q14055 689 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 LPAL2Q16609 132 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 JAKMIP3Q5VZ66 844 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 ZNF746Q6NUN9 644 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 CYP26C1Q6V0L0 522 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 AGMOQ6ZNB7 445 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 SECISBP2LQ93073 1101 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 TRAIPQ9BWF2 469 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 GCOM2Q9BZD3 368 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 NT5C3AQ9H0P0 336 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 EPC1Q9H2F5 836 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 ZSCAN32Q9NX65 697 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 PRG3Q9Y2Y8 225 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 SAMM50Q9Y512 469 aa15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-208ENST00000595726 CARNS1A5YM72 827 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 SMCO2A6NFE2 343 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 F8W810 466 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 SH2B2O14492 632 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 GAS2O43903 313 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 LILRB5O75023 590 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 ZNF623O75123 536 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 POMCP01189 267 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 SOD2P04179 222 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 OATP04181 439 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 SPEM2Q0P670 501 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 UGCGQ16739 394 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 SLC44A4Q53GD3 710 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 CASC1Q6TDU7 716 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 GLYCTKQ8IVS8 523 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 ZNF710Q8N1W2 664 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 FANCBQ8NB91 859 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 B3GALT6Q96L58 329 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 SH2D3AQ9BRG2 576 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 DDX23Q9BUQ8 820 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 LRRC2Q9BYS8 371 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 RHOBTB2Q9BYZ6 727 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 NRBP2Q9NSY0 501 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 MARCH5Q9NX47 278 aa15.49■□□□□ 0.07
SHKBP1-208ENST00000595726 TMEM150BA6NC51 233 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 SKIP12755 728 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 CLK2P49760 499 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 NTHL1P78549 312 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 PRKCEQ02156 737 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 MLF2Q15773 248 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 KSR1Q8IVT5 923 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 SMAP1Q8IYB5 467 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 URGCPQ8TCY9 931 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 NELL1Q92832 810 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 FAM167AQ96KS9 214 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 FAM193BQ96PV7 902 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 RXFP1Q9HBX9 757 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 ANO2Q9NQ90 1003 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 TBC1D22BQ9NU19 505 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 PCDHB2Q9Y5E7 798 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 V9GY48 417 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 ZFYVE26Q68DK2 2539 aa15.48■□□□□ 0.07
SHKBP1-208ENST00000595726 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 TGM5O43548 720 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 CDC45O75419 566 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 CALM1P0DP23 149 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 CALM2P0DP24 149 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 CALM3P0DP25 149 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 FSHRP23945 695 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 OR1G1P47890 313 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 TMTC2Q8N394 836 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 CRYGNQ8WXF5 182 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 RSPH1Q8WYR4 309 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 PHKBQ93100 1093 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 BORCS6Q96GS4 357 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 HERC2P3Q9BVR0 1158 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 PRKD2Q9BZL6 878 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 LTB4R2Q9NPC1 389 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 STK39Q9UEW8 545 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 DPP7Q9UHL4 492 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 SLC12A7Q9Y666 1083 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 FAM208BQ5VWN6 2430 aa15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 MYH9P35579 1960 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-208ENST00000595726 SLC27A2O14975 620 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 TBC1D4O60343 1298 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 HOXB3P14651 431 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 RPL17P18621 184 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 SFPQP23246 707 aaKnown RBP eCLIP15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 GLUD2P49448 558 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 AP3B2Q13367 1082 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 NECTIN1Q15223 517 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 TARBP2Q15633 366 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 PRR16Q569H4 304 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 CREB3L3Q68CJ9 461 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 ELMSAN1Q6PJG2 1045 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms