RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 POLR3CQ9BUI4 534 aaPredicted RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 EIF2AQ9BY44 585 aaKnown RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 IGFLR1Q9H665 355 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 CD320Q9NPF0 282 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 TLR9Q9NR96 1032 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 AAASQ9NRG9 546 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 DBR1Q9UK59 544 aaKnown RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 INPP5FQ9Y2H2 1132 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 PCDHB2Q9Y5E7 798 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 TRANK1O15050 2925 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 GRXCR2A6NFK2 248 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 NT5C1B-RDH14C9J2C7 533 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 INO80B-WBP1J3KQ70 363 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 PER2O15055 1255 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 ASAP2O43150 1006 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 ZNF623O75123 536 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 OFD1O75665 1012 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 ERLIN2O94905 339 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 SKIP12755 728 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 XRCC6P12956 609 aaKnown RBP eCLIP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 NCLP19338 710 aaKnown RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 CCT6AP40227 531 aaKnown RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 RAB27AP51159 221 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 BCAR1P56945 870 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 PLCB3Q01970 1234 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 UBE3AQ05086 875 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 ADAM15Q13444 863 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 TFDP1Q14186 410 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 MXD4Q14582 209 aaPredicted RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 DUSP6Q16828 381 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 CSPP1Q1MSJ5 1256 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 PLPP4Q5VZY2 271 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 HAUS3Q68CZ6 603 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 MCTP1Q6DN14 999 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 AGMOQ6ZNB7 445 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 RBM23Q86U06 439 aaKnown RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 CDR2LQ86X02 465 aaPredicted RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 ZNF280BQ86YH2 543 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 FAM178BQ8IXR5 827 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 SLC39A11Q8N1S5 342 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 EFHBQ8N7U6 833 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 IGSF22Q8N9C0 903 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 SMG8Q8ND04 991 aaKnown RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 VN1R2Q8NFZ6 395 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 ERMNQ8TAM6 284 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 SNX29Q8TEQ0 813 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 BCL7CQ8WUZ0 217 aaPredicted RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 NACC1Q96RE7 527 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 MMTAG2Q9BU76 263 aaKnown RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 MRPL9Q9BYD2 267 aaKnown RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 NRDE2Q9H7Z3 1164 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 TBC1D13Q9NVG8 400 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 CLEC1BQ9P126 229 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 DNAJB4Q9UDY4 337 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 BARX2Q9UMQ3 279 aaPredicted RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 LZTS1Q9Y250 596 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 HES2Q9Y543 173 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 SPTBN5Q9NRC6 3674 aaKnown RBP6.5□□□□□ -1.37
SSX4B-201ENST00000595235 XIRP2A4UGR9 3374 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 MYH15Q9Y2K3 1946 aa6.5□□□□□ -1.37
SSX4B-201ENST00000595235 ARHGEF35A5YM69 484 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 LRRIQ4A6NIV6 560 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 HIDE1A8MVS5 230 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 H3BQV1 296 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 MBTPS2O43462 519 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 ZC3H11AO75152 810 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSX4B-201ENST00000595235 DDHD2O94830 711 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 EDN1P05305 212 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 ARF4P18085 180 aaPredicted RBP6.49□□□□□ -1.37
SSX4B-201ENST00000595235 CYP11B2P19099 503 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 CDC25AP30304 524 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 AXLP30530 894 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 PPM1AP35813 382 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 PRPHP41219 470 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 SLC11A1P49279 550 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 MCM2P49736 904 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 NDUFV1P49821 464 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 ATP2C1P98194 919 aaPredicted RBP6.49□□□□□ -1.37
SSX4B-201ENST00000595235 POU5F1BQ06416 359 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 CUL4AQ13619 759 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 NOMO2Q5JPE7 1267 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 CDCA2Q69YH5 1023 aaPredicted RBP6.49□□□□□ -1.37
SSX4B-201ENST00000595235 NOTUMQ6P988 496 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 PADI6Q6TGC4 694 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 GLB1LQ6UWU2 654 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 KCNK18Q7Z418 384 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 MRPL10Q7Z7H8 261 aaKnown RBP6.49□□□□□ -1.37
SSX4B-201ENST00000595235 MCPH1Q8NEM0 835 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 MICAL1Q8TDZ2 1067 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 PGBD4Q96DM1 585 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 MSLNLQ96KJ4 702 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 TCF25Q9BQ70 676 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 KIFC3Q9BVG8 833 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 APOL6Q9BWW8 343 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 NFKBIZQ9BYH8 718 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 BACH2Q9BYV9 841 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 GBP3Q9H0R5 595 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 CSRNP2Q9H175 543 aa6.49□□□□□ -1.37
SSX4B-201ENST00000595235 BHMT2Q9H2M3 363 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms