RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
USE1-205ENST00000594724 MRPL9Q9BYD2 267 aaKnown RBP16.34■□□□□ 0.21
USE1-205ENST00000594724 CSRNP2Q9H175 543 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 TBC1D13Q9NVG8 400 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 CLDND1Q9NY35 253 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 PLXNA4Q9HCM2 1894 aa16.33■□□□□ 0.21
USE1-205ENST00000594724 H3BQ06 376 aaPredicted RBP16.33■□□□□ 0.2
USE1-205ENST00000594724 NCLP19338 710 aaKnown RBP16.33■□□□□ 0.2
USE1-205ENST00000594724 BCAR1P56945 870 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 ERVFC1P60507 584 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 UBE3AQ05086 875 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 SF3A1Q15459 793 aaKnown RBP16.33■□□□□ 0.2
USE1-205ENST00000594724 ARL6IP4Q66PJ3 421 aaKnown RBP16.33■□□□□ 0.2
USE1-205ENST00000594724 RBM23Q86U06 439 aaKnown RBP16.33■□□□□ 0.2
USE1-205ENST00000594724 ZBTB8OSQ8IWT0 167 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 MRPS27Q92552 414 aaKnown RBP16.33■□□□□ 0.2
USE1-205ENST00000594724 NECAB3Q96P71 396 aaPredicted RBP16.33■□□□□ 0.2
USE1-205ENST00000594724 PNMA5Q96PV4 448 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 GBP3Q9H0R5 595 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 NRDE2Q9H7Z3 1164 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 RSAD1Q9HA92 442 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 TLR9Q9NR96 1032 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 SPG21Q9NZD8 308 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 HES2Q9Y543 173 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 IPPQ9Y573 584 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 ATG2AQ2TAZ0 1938 aa16.33■□□□□ 0.2
USE1-205ENST00000594724 TTLL13PA6NNM8 815 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 LINC01565O15544 149 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 ZC3H11AO75152 810 aaKnown RBP eCLIP16.32■□□□□ 0.2
USE1-205ENST00000594724 ITGA4P13612 1032 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 LIG1P18858 919 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 ALDH7A1P49419 539 aaKnown RBP16.32■□□□□ 0.2
USE1-205ENST00000594724 PLCB3Q01970 1234 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 RNASELQ05823 741 aaKnown RBP16.32■□□□□ 0.2
USE1-205ENST00000594724 MYO7AQ13402 2215 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 LEXMQ3ZCV2 418 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 CDCA2Q69YH5 1023 aaPredicted RBP16.32■□□□□ 0.2
USE1-205ENST00000594724 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 ZNF280BQ86YH2 543 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 SLC39A11Q8N1S5 342 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
USE1-205ENST00000594724 CCDC51Q96ER9 411 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 UHRF1Q96T88 793 aaPredicted RBP16.32■□□□□ 0.2
USE1-205ENST00000594724 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 RUSC1Q9BVN2 902 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 APOL6Q9BWW8 343 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 FZD8Q9H461 694 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 PUF60Q9UHX1 559 aaKnown RBP16.32■□□□□ 0.2
USE1-205ENST00000594724 USP20Q9Y2K6 914 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 CLIC4Q9Y696 253 aa16.32■□□□□ 0.2
USE1-205ENST00000594724 SPTBN5Q9NRC6 3674 aaKnown RBP16.31■□□□□ 0.2
USE1-205ENST00000594724 A0A1B0GUA9 196 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 PER2O15055 1255 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 B4GALT3O60512 393 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 HIP1RO75146 1068 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 DDHD2O94830 711 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 NPTXRO95502 500 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 POMCP01189 267 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 PPM1AP35813 382 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 LTBRP36941 435 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 NAMPTP43490 491 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 NRIP1P48552 1158 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 KRT17Q04695 432 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 GRIN1Q05586 938 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 DLX2Q07687 328 aaPredicted RBP16.31■□□□□ 0.2
USE1-205ENST00000594724 RESTQ13127 1097 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 COL19A1Q14993 1142 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 CTC1Q2NKJ3 1217 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 HYIQ5T013 277 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 RINT1Q6NUQ1 792 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 CABP7Q86V35 215 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 CNNM3Q8NE01 707 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 URGCPQ8TCY9 931 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 KIFAP3Q92845 792 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 SNX21Q969T3 373 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 IFT74Q96LB3 600 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 TRIM6Q9C030 488 aaPredicted RBP16.31■□□□□ 0.2
USE1-205ENST00000594724 C2orf40Q9H1Z8 148 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 PRMT7Q9NVM4 692 aaPredicted RBP16.31■□□□□ 0.2
USE1-205ENST00000594724 DNAJB4Q9UDY4 337 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
USE1-205ENST00000594724 TCF20Q9UGU0 1960 aaKnown RBP16.31■□□□□ 0.2
USE1-205ENST00000594724 CNTNAP2Q9UHC6 1331 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 FSCN2O14926 492 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 NCK2O43639 380 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 EDN1P05305 212 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
USE1-205ENST00000594724 PRKCBP05771 671 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 GALTP07902 379 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 RAD51AP2Q09MP3 1159 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 ADAM15Q13444 863 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 PPP2R5AQ15172 486 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 MAPK6Q16659 721 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 FAM187BQ17R55 369 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 PLPP4Q5VZY2 271 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 SLC27A1Q6PCB7 646 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 C1orf186Q6ZWK4 172 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms