RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 ATAT1Q5SQI0 421 aa17.79■□□□□ 0.44
GTF2F1-203ENST00000594213 EXOC8Q8IYI6 725 aa17.79■□□□□ 0.44
GTF2F1-203ENST00000594213 PSPC1Q8WXF1 523 aaKnown RBP17.79■□□□□ 0.44
GTF2F1-203ENST00000594213 SLC7A3Q8WY07 619 aa17.79■□□□□ 0.44
GTF2F1-203ENST00000594213 RGL1Q9NZL6 768 aa17.79■□□□□ 0.44
GTF2F1-203ENST00000594213 USTQ9Y2C2 406 aa17.79■□□□□ 0.44
GTF2F1-203ENST00000594213 STK36Q9NRP7 1315 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 CCDC194A0A1B0GVG4 234 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 ZBTB39O15060 712 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 CTDNEP1O95476 244 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 SRGAP2CP0DJJ0 459 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 NUBP1P53384 320 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 RNASELQ05823 741 aaKnown RBP17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 ZBTB33Q86T24 672 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 KLHL5Q96PQ7 755 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 LXNQ9BS40 222 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 TMEM175Q9BSA9 504 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 SMOC2Q9H3U7 446 aa17.78■□□□□ 0.44
GTF2F1-203ENST00000594213 CNTNAP2Q9UHC6 1331 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 INPPL1O15357 1258 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 ASAP2O43150 1006 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 GAS2O43903 313 aaKnown RBP17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 PFKFB2O60825 505 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 EFEMP2O95967 443 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 NCLP19338 710 aaKnown RBP17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 YWHABP31946 246 aaKnown RBP17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 CA8P35219 290 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 MTMR3Q13615 1198 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 GPR149Q86SP6 731 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 FERMT3Q86UX7 667 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 PPFIBP1Q86W92 1011 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 SMG8Q8ND04 991 aaKnown RBP17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 GBP3Q9H0R5 595 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 RSAD1Q9HA92 442 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 XPNPEP1Q9NQW7 623 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 KANSL3Q9P2N6 904 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 STK39Q9UEW8 545 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 LIMD1Q9UGP4 676 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 TPCN1Q9ULQ1 816 aa17.77■□□□□ 0.44
GTF2F1-203ENST00000594213 PTPRZ1P23471 2315 aaPredicted RBP17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 NRP1O14786 923 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 CCNT1O60563 726 aaKnown RBP17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 DTNBO60941 627 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 CDKL5O76039 1030 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 ALDH2P05091 517 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 ASGR2P07307 311 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 CNPP09543 421 aaKnown RBP17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 CLCN4P51793 760 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 EMC2Q15006 297 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 TMC5Q6UXY8 1006 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 CABP7Q86V35 215 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 PLCD3Q8N3E9 789 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 TDRD5Q8NAT2 981 aaKnown RBP17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 URGCPQ8TCY9 931 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 TNFRSF25Q93038 417 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 DYDC2Q96IM9 177 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 SLKQ9H2G2 1235 aaPredicted RBP17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 ZSWIM4Q9H7M6 989 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 FAN1Q9Y2M0 1017 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 CFAP54Q96N23 3096 aa17.76■□□□□ 0.43
GTF2F1-203ENST00000594213 MYO10Q9HD67 2058 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 FAM205CA6NFA0 338 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 SLITRK3O94933 977 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 PTENP60484 403 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 POU5F1BQ06416 359 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 OTUD6AQ7L8S5 288 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 IFNLR1Q8IU57 520 aaPredicted RBP17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 RNF168Q8IYW5 571 aaPredicted RBP17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 TMEM87AQ8NBN3 555 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 RNF149Q8NC42 400 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 TCP11Q8WWU5 503 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 NAP1L4Q99733 375 aaKnown RBP17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 HSD17B14Q9BPX1 270 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 MARCH5Q9NX47 278 aa17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 DBR1Q9UK59 544 aaKnown RBP17.75■□□□□ 0.43
GTF2F1-203ENST00000594213 RIF1Q5UIP0 2472 aaKnown RBP17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 GALR2O43603 387 aaPredicted RBP17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 TSPAN1O60635 241 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 LYPLA2O95372 231 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 POMCP01189 267 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 FDPSP14324 419 aaKnown RBP17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 DSC1Q08554 894 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 CTTNQ14247 550 aaKnown RBP17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 PCBP1Q15365 356 aaKnown RBP eCLIP17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 AMHR2Q16671 573 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 XKR9Q5GH70 373 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 TAS1R1Q7RTX1 841 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 COLGALT2Q8IYK4 626 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 TMEM105Q8N8V8 129 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 CNNM3Q8NE01 707 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 EMILIN2Q9BXX0 1053 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 EIF2AQ9BY44 585 aaKnown RBP17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 IRF2BPLQ9H1B7 796 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 SFXN1Q9H9B4 322 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 UBN1Q9NPG3 1134 aa17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 BMP2KQ9NSY1 1161 aaPredicted RBP17.74■□□□□ 0.43
GTF2F1-203ENST00000594213 FAM86C1Q9NVL1 165 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms