RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 CLEC18AA5D8T8 446 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 GOLGA8CPA6NN73 597 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 TEX28O15482 410 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 RRP8O43159 456 aaKnown RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 GLUD1P00367 558 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 AFPP02771 609 aaKnown RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 C8AP07357 584 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 EIF2AK2P19525 551 aaKnown RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 BCKDHBP21953 392 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 MARK3P27448 753 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 SLC1A4P43007 532 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 DHPSP49366 369 aaPredicted RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 POLGP54098 1239 aaPredicted RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 AK2P54819 239 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 CLDN6P56747 220 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 RHDQ02161 417 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 TLE3Q04726 772 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 LMAN2Q12907 356 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 GIT2Q14161 759 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 STXBP2Q15833 593 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 MARCH8Q5T0T0 291 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 PMS2CLQ68D20 193 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 TTBK2Q6IQ55 1244 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 TAF2Q6P1X5 1199 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 TXNDC11Q6PKC3 985 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 CLEC18BQ6UXF7 455 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 CYP26C1Q6V0L0 522 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 SLC24A5Q71RS6 500 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 ARMCX6Q7L4S7 300 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 RSPH3Q86UC2 560 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 ZC3H18Q86VM9 953 aaKnown RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 PALB2Q86YC2 1186 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 NPAS3Q8IXF0 933 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 MMP21Q8N119 569 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 CLEC18CQ8NCF0 446 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 GMCL1P1Q8NEA9 526 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 TMEM40Q8WWA1 233 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 DNASE1L2Q92874 299 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 MCRS1Q96EZ8 462 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 WBP1Q96G27 269 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 IGSF21Q96ID5 467 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 PPP1R16BQ96T49 567 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 NUSAP1Q9BXS6 441 aaKnown RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 RHOBTB2Q9BYZ6 727 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 PRKD2Q9BZL6 878 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 CSRNP2Q9H175 543 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 RANBP17Q9H2T7 1088 aaKnown RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 BRD9Q9H8M2 597 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 CDHR5Q9HBB8 845 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 LRRC4CQ9HCJ2 640 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 TMEM74BQ9NUR3 256 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 HCFC1R1Q9NWW0 138 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 TMEM161AQ9NX61 479 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 TUBE1Q9UJT0 475 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 GINS2Q9Y248 185 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 NOC2LQ9Y3T9 749 aaKnown RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 PCDHB9Q9Y5E1 797 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 ZFP37Q9Y6Q3 630 aaPredicted RBP3.6□□□□□ -1.83
VRK3-204ENST00000593912 CCDC171Q6TFL3 1326 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 FANCIQ9NVI1 1328 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 NBASA2RRP1 2371 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 SLC38A8A6NNN8 435 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 CCL16O15467 120 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 OPHN1O60890 802 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 AKAP3O75969 853 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 ITGB2P05107 769 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 FCARP24071 287 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 COL8A1P27658 744 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 GDI1P31150 447 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 FAM189BP81408 668 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 SP4Q02446 784 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 EXOSC9Q06265 439 aaKnown RBP3.59□□□□□ -1.83
VRK3-204ENST00000593912 KCNH2Q12809 1159 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 PPFIA1Q13136 1202 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 LRRC32Q14392 662 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 WDR43Q15061 677 aaKnown RBP eCLIP3.59□□□□□ -1.83
VRK3-204ENST00000593912 GRIK4Q16099 956 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 USH1GQ495M9 461 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 PKDCCQ504Y2 493 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 KIAA1614Q5VZ46 1190 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 ATG14Q6ZNE5 492 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 TAS1R1Q7RTX1 841 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 ZNF280BQ86YH2 543 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 NAXDQ8IW45 347 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 SPACA3Q8IXA5 215 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 ABI1Q8IZP0 508 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 MINDY1Q8N5J2 469 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 PDCD7Q8N8D1 485 aaKnown RBP3.59□□□□□ -1.83
VRK3-204ENST00000593912 TTC8Q8TAM2 541 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 TRAPPC12Q8WVT3 735 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 MKL1Q969V6 931 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 NAF1Q96HR8 494 aaKnown RBP3.59□□□□□ -1.83
VRK3-204ENST00000593912 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.59□□□□□ -1.83
VRK3-204ENST00000593912 REPIN1Q9BWE0 567 aaKnown RBP3.59□□□□□ -1.83
VRK3-204ENST00000593912 CELF4Q9BZC1 486 aaKnown RBP3.59□□□□□ -1.83
VRK3-204ENST00000593912 GBP3Q9H0R5 595 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 MLXIPQ9HAP2 919 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 ZNF334Q9HCZ1 680 aaPredicted RBP3.59□□□□□ -1.83
VRK3-204ENST00000593912 CHST12Q9NRB3 414 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 C1orf112Q9NSG2 853 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms