RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ZDBF2Q9HCK1 2354 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 SSBP05455 408 aaKnown RBP eCLIP18.29■□□□□ 0.52
LIG1-205ENST00000593425 P4HBP07237 508 aaKnown RBP18.29■□□□□ 0.52
LIG1-205ENST00000593425 SRGAP2CP0DJJ0 459 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 HOXA11P31270 313 aaPredicted RBP18.29■□□□□ 0.52
LIG1-205ENST00000593425 ATAT1Q5SQI0 421 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 PPP4R3AQ6IN85 833 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 TMC5Q6UXY8 1006 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 MRPL10Q7Z7H8 261 aaKnown RBP18.29■□□□□ 0.52
LIG1-205ENST00000593425 ZDHHC14Q8IZN3 488 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 URGCPQ8TCY9 931 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 OXER1Q8TDS5 423 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 PSPC1Q8WXF1 523 aaKnown RBP18.29■□□□□ 0.52
LIG1-205ENST00000593425 KLHL5Q96PQ7 755 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 LXNQ9BS40 222 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 PDRG1Q9NUG6 133 aa18.29■□□□□ 0.52
LIG1-205ENST00000593425 CCNT1O60563 726 aaKnown RBP18.28■□□□□ 0.52
LIG1-205ENST00000593425 DKC1O60832 514 aaKnown RBP eCLIP18.28■□□□□ 0.52
LIG1-205ENST00000593425 YWHABP31946 246 aaKnown RBP18.28■□□□□ 0.52
LIG1-205ENST00000593425 RFC5P40937 340 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 LAMTOR4Q0VGL1 99 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 EMC2Q15006 297 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 EARS2Q5JPH6 523 aaKnown RBP18.28■□□□□ 0.52
LIG1-205ENST00000593425 PIK3AP1Q6ZUJ8 805 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 SRGAP1Q7Z6B7 1085 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 CABP7Q86V35 215 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 C4orf19Q8IY42 314 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 TMEM105Q8N8V8 129 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 RGL1Q9NZL6 768 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 LIMD1Q9UGP4 676 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 PPME1Q9Y570 386 aa18.28■□□□□ 0.52
LIG1-205ENST00000593425 STK36Q9NRP7 1315 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 CNTNAP2Q9UHC6 1331 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 FAM205CA6NFA0 338 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 H0Y858 1186 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 ZBTB39O15060 712 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 POMCP01189 267 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 CNPP09543 421 aaKnown RBP18.27■□□□□ 0.52
LIG1-205ENST00000593425 GCFC2P16383 781 aaKnown RBP18.27■□□□□ 0.52
LIG1-205ENST00000593425 CLCN4P51793 760 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 SPIRE1Q08AE8 756 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 EPHA7Q15375 998 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 NCAPH2Q6IBW4 605 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 GPR149Q86SP6 731 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 PPFIBP1Q86W92 1011 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 RNF149Q8NC42 400 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 SMG8Q8ND04 991 aaKnown RBP18.27■□□□□ 0.52
LIG1-205ENST00000593425 ATOH1Q92858 354 aaPredicted RBP18.27■□□□□ 0.52
LIG1-205ENST00000593425 DYDC2Q96IM9 177 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 TMEM175Q9BSA9 504 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 SFXN1Q9H9B4 322 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 MARCH5Q9NX47 278 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 USTQ9Y2C2 406 aa18.27■□□□□ 0.52
LIG1-205ENST00000593425 TDRD15B5MCY1 1934 aaKnown RBP18.27■□□□□ 0.51
LIG1-205ENST00000593425 NRP1O14786 923 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 TBX3O15119 743 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 GALR2O43603 387 aaPredicted RBP18.26■□□□□ 0.51
LIG1-205ENST00000593425 GFRA3O60609 400 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 LILRB3O75022 631 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
LIG1-205ENST00000593425 KLRC2P26717 231 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 CYP4A11Q02928 519 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 CTTNQ14247 550 aaKnown RBP18.26■□□□□ 0.51
LIG1-205ENST00000593425 XKR9Q5GH70 373 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 FAM193BQ96PV7 902 aaPredicted RBP18.26■□□□□ 0.51
LIG1-205ENST00000593425 EMILIN2Q9BXX0 1053 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 EIF2AQ9BY44 585 aaKnown RBP18.26■□□□□ 0.51
LIG1-205ENST00000593425 XPNPEP1Q9NQW7 623 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 FAN1Q9Y2M0 1017 aa18.26■□□□□ 0.51
LIG1-205ENST00000593425 CDKL5O76039 1030 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 ALDH2P05091 517 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 CCDC149Q6ZUS6 474 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 EXOC8Q8IYI6 725 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 PLCD3Q8N3E9 789 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 TCP11Q8WWU5 503 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 MTRQ99707 1265 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 KANSL3Q9P2N6 904 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 TPCN1Q9ULQ1 816 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 PRG3Q9Y2Y8 225 aaPredicted RBP18.25■□□□□ 0.51
LIG1-205ENST00000593425 IPPQ9Y573 584 aa18.25■□□□□ 0.51
LIG1-205ENST00000593425 USP34Q70CQ2 3546 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 SPDYE4A6NLX3 237 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 C2CD2LO14523 706 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 GAS2O43903 313 aaKnown RBP18.24■□□□□ 0.51
LIG1-205ENST00000593425 ST18O60284 1047 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 MARCH6O60337 910 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 TSPAN1O60635 241 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 ERLIN2O94905 339 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 CTDNEP1O95476 244 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 SOD2P04179 222 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 NUBP1P53384 320 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 OTUD6AQ7L8S5 288 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 TAS1R1Q7RTX1 841 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 COLGALT2Q8IYK4 626 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 CPB2Q96IY4 423 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 HERC2P3Q9BVR0 1158 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 IRF2BPLQ9H1B7 796 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms