RNA–Protein interactions for RNA: ENST00000593337.5

IRF3-205, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-205ENST00000593337 NCKAP1LP55160 1127 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 MAPK6Q16659 721 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 CNNM4Q6P4Q7 775 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 TMEM87AQ8NBN3 555 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 TMEM161BQ8NDZ6 487 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 STAMQ92783 540 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 TRIM9Q9C026 710 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 TMEM134Q9H6X4 195 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 SERTAD1Q9UHV2 236 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 TRIP11Q15643 1979 aa20.24■□□□□ 0.83
IRF3-205ENST00000593337 A0A0U1RQF3 1178 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 TTLL13PA6NNM8 815 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 UPP2O95045 317 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 SLFN14P0C7P3 912 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 MYOGP15173 224 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 SYKP43405 635 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 RAB30Q15771 203 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 UBXN11Q5T124 520 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 TWF2Q6IBS0 349 aaKnown RBP20.23■□□□□ 0.83
IRF3-205ENST00000593337 FAM117BQ6P1L5 589 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 NOTUMQ6P988 496 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 ZNF598Q86UK7 904 aaKnown RBP20.23■□□□□ 0.83
IRF3-205ENST00000593337 ECHDC2Q86YB7 292 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 CCDC51Q96ER9 411 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 CPB2Q96IY4 423 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 ELAC1Q9H777 363 aaKnown RBP20.23■□□□□ 0.83
IRF3-205ENST00000593337 USP25Q9UHP3 1055 aa20.23■□□□□ 0.83
IRF3-205ENST00000593337 TDRD15B5MCY1 1934 aaKnown RBP20.23■□□□□ 0.83
IRF3-205ENST00000593337 CITO14578 2027 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 ACKR2O00590 384 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 TLL1O43897 1013 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 SFR1Q86XK3 245 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 MYCT1Q8N699 235 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 SP7Q8TDD2 431 aaPredicted RBP20.22■□□□□ 0.83
IRF3-205ENST00000593337 ZNF689Q96CS4 500 aaPredicted RBP20.22■□□□□ 0.83
IRF3-205ENST00000593337 RAD9AQ99638 391 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 LRRC27Q9C0I9 530 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 FAM105AQ9NUU6 356 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 RNF19AQ9NV58 838 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 TMEM161AQ9NX61 479 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 KCNG1Q9UIX4 513 aa20.22■□□□□ 0.83
IRF3-205ENST00000593337 COL4A4P53420 1690 aaPredicted RBP20.22■□□□□ 0.83
IRF3-205ENST00000593337 A0A1B0GUA9 196 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 LCHNA4D1U4 455 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 K7ERI5 159 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 TRAK2O60296 914 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 DGKIO75912 1065 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 ARHGEF15O94989 841 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 STAG3L1P0CL83 205 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 MAPTP10636 758 aaKnown RBP20.21■□□□□ 0.83
IRF3-205ENST00000593337 RAB27AP51159 221 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 SMTNP53814 917 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 AMPD3Q01432 767 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 CSPP1Q1MSJ5 1256 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 LONRF3Q496Y0 759 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 TPRNQ4KMQ1 711 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 NT5DC1Q5TFE4 455 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 CLEC17AQ6ZS10 378 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 CEP57L1Q8IYX8 460 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 C7orf25Q9BPX7 421 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 ZBED2Q9BTP6 218 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 ZHX3Q9H4I2 956 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 SEL1LQ9UBV2 794 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 MSRAQ9UJ68 235 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 INSL6Q9Y581 213 aa20.21■□□□□ 0.83
IRF3-205ENST00000593337 PDCD11Q14690 1871 aaKnown RBP20.2■□□□□ 0.82
IRF3-205ENST00000593337 H0YCG3 227 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 K7ENM7 598 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 ZNF623O75123 536 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 GAP43P17677 238 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 LIG1P18858 919 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 CASP1P29466 404 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 PRPF4BQ13523 1007 aaKnown RBP20.2■□□□□ 0.82
IRF3-205ENST00000593337 GPR153Q6NV75 609 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 HAUS6Q7Z4H7 955 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 FAM178BQ8IXR5 827 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 GRAMD1CQ8IYS0 662 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 TIFAQ96CG3 184 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 EIF2AQ9BY44 585 aaKnown RBP20.2■□□□□ 0.82
IRF3-205ENST00000593337 NKX2-4Q9H2Z4 354 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 ST6GALNAC4Q9H4F1 302 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 PDZD7Q9H5P4 517 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 OLFML3Q9NRN5 406 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
IRF3-205ENST00000593337 USP20Q9Y2K6 914 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 PCDHB7Q9Y5E2 793 aa20.2■□□□□ 0.82
IRF3-205ENST00000593337 TMEM265A0A087WTH1 108 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 N4BP3O15049 544 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 PPP1R37O75864 691 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 EOMESO95936 686 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 CA3P07451 260 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 IDEP14735 1019 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 IBSPP21815 317 aaPredicted RBP20.19■□□□□ 0.82
IRF3-205ENST00000593337 NMT1P30419 496 aaKnown RBP20.19■□□□□ 0.82
IRF3-205ENST00000593337 AFMP43652 599 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 GATMP50440 423 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
IRF3-205ENST00000593337 COASYQ13057 564 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 SLC27A1Q6PCB7 646 aa20.19■□□□□ 0.82
IRF3-205ENST00000593337 MRPL10Q7Z7H8 261 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms