RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 TRAF3IP3Q9Y228 551 aa18.53■□□□□ 0.56
CCDC130-212ENST00000593174 COL1A2P08123 1366 aa18.52■□□□□ 0.56
CCDC130-212ENST00000593174 FANCGO15287 622 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 ZRANB2O95218 330 aaKnown RBP eCLIP18.52■□□□□ 0.55
CCDC130-212ENST00000593174 F2P00734 622 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 C6orf222P0C671 652 aaPredicted RBP18.52■□□□□ 0.55
CCDC130-212ENST00000593174 PRMT2P55345 433 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 FKBP3Q00688 224 aaKnown RBP18.52■□□□□ 0.55
CCDC130-212ENST00000593174 PPFIA1Q13136 1202 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 DRP2Q13474 957 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 PPP2R5AQ15172 486 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 TSR1Q2NL82 804 aaKnown RBP18.52■□□□□ 0.55
CCDC130-212ENST00000593174 EDRF1Q3B7T1 1238 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 LRRN4CLQ8ND94 238 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 KAT2BQ92831 832 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 IKZF4Q9H2S9 585 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 SPC25Q9HBM1 224 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 ZMYM2Q9UBW7 1377 aa18.52■□□□□ 0.55
CCDC130-212ENST00000593174 TGFB1I1O43294 461 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 C22orf31O95567 290 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 TUBBP07437 444 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 KLRC1P26715 233 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 MKRN4PQ13434 485 aaPredicted RBP18.51■□□□□ 0.55
CCDC130-212ENST00000593174 EFCAB12Q6NXP0 572 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 LRRC55Q6ZSA7 311 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 METTL13Q8N6R0 699 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 PRPF31Q8WWY3 499 aaKnown RBP18.51■□□□□ 0.55
CCDC130-212ENST00000593174 ZBTB10Q96DT7 871 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 IQCDQ96DY2 449 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 UPF3AQ9H1J1 476 aaKnown RBP18.51■□□□□ 0.55
CCDC130-212ENST00000593174 VPS16Q9H269 839 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 TMEM206Q9H813 350 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 CDC23Q9UJX2 597 aa18.51■□□□□ 0.55
CCDC130-212ENST00000593174 DENND3A2RUS2 1198 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 CTAGE9A4FU28 777 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 MYADML2A6NDP7 307 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 MAGEB2O15479 319 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 PGK1P00558 417 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 NAMPTP43490 491 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 PSEN2P49810 448 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 DNM2P50570 870 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 FXR1P51114 621 aaKnown RBP eCLIP18.5■□□□□ 0.55
CCDC130-212ENST00000593174 UBXN1Q04323 297 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 ADAM9Q13443 819 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 MFSD10Q14728 455 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 MTF1Q14872 753 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 GRIK4Q16099 956 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 KIAA0753Q2KHM9 967 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 GNASQ5JWF2 1037 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 MAP3K21Q5TCX8 1036 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 SRGAP1Q7Z6B7 1085 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 RETREG2Q8NC44 543 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 PSPC1Q8WXF1 523 aaKnown RBP18.5■□□□□ 0.55
CCDC130-212ENST00000593174 HVCN1Q96D96 273 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 CNOT6LQ96LI5 555 aaKnown RBP18.5■□□□□ 0.55
CCDC130-212ENST00000593174 CEP63Q96MT8 703 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 NUP58Q9BVL2 599 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 GBP3Q9H0R5 595 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 SUCLA2Q9P2R7 463 aaPredicted RBP18.5■□□□□ 0.55
CCDC130-212ENST00000593174 TRIM17Q9Y577 477 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 FHOD1Q9Y613 1164 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 ADGRA3Q8IWK6 1321 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 LRRIQ4A6NIV6 560 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 LGALS16A8MUM7 142 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 H0YCG3 227 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 CETN3O15182 167 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 CLIC2O15247 247 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 KPNA6O60684 536 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 PNMA6AP0CW24 399 aaPredicted RBP18.5■□□□□ 0.55
CCDC130-212ENST00000593174 HS2ST1Q7LGA3 356 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 SLAIN1Q8ND83 568 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 DEPTORQ8TB45 409 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 LZTFL1Q9NQ48 299 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 XPNPEP3Q9NQH7 507 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 TAB2Q9NYJ8 693 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 TBX20Q9UMR3 447 aa18.5■□□□□ 0.55
CCDC130-212ENST00000593174 NR2F2P24468 414 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 KRT9P35527 623 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 MTIF2P46199 727 aaKnown RBP18.49■□□□□ 0.55
CCDC130-212ENST00000593174 CLCN3P51790 818 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 CAPSQ13938 189 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 MXD4Q14582 209 aaPredicted RBP18.49■□□□□ 0.55
CCDC130-212ENST00000593174 BRD3Q15059 726 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 MTHFD1LQ6UB35 978 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 ZC3H3Q8IXZ2 948 aaKnown RBP18.49■□□□□ 0.55
CCDC130-212ENST00000593174 OR8K1Q8NGG5 319 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 GOLGA5Q8TBA6 731 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 SETD4Q9NVD3 440 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 WBP1LQ9NX94 342 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 ARHGAP28Q9P2N2 729 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 EXOC7Q9UPT5 735 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 CENPFP49454 3210 aa18.49■□□□□ 0.55
CCDC130-212ENST00000593174 RRN3P2A6NIE6 340 aa18.48■□□□□ 0.55
CCDC130-212ENST00000593174 HAS3O00219 553 aa18.48■□□□□ 0.55
CCDC130-212ENST00000593174 NR3C1P04150 777 aa18.48■□□□□ 0.55
CCDC130-212ENST00000593174 INHAP05111 366 aa18.48■□□□□ 0.55
CCDC130-212ENST00000593174 SMIM10L2AP0DMW4 78 aa18.48■□□□□ 0.55
CCDC130-212ENST00000593174 SMIM10L2BP0DMW5 78 aa18.48■□□□□ 0.55
CCDC130-212ENST00000593174 RPL13P26373 211 aaKnown RBP18.48■□□□□ 0.55
CCDC130-212ENST00000593174 ABCD1P33897 745 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms