RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 NOTUMQ6P988 496 aa16.51■□□□□ 0.23
SF3A2-207ENST00000592839 THNSL1Q8IYQ7 743 aa16.51■□□□□ 0.23
SF3A2-207ENST00000592839 PIGOQ8TEQ8 1089 aa16.51■□□□□ 0.23
SF3A2-207ENST00000592839 TMEM175Q9BSA9 504 aa16.51■□□□□ 0.23
SF3A2-207ENST00000592839 LRFN3Q9BTN0 628 aa16.51■□□□□ 0.23
SF3A2-207ENST00000592839 RAB34Q9BZG1 259 aa16.51■□□□□ 0.23
SF3A2-207ENST00000592839 KANSL3Q9P2N6 904 aa16.51■□□□□ 0.23
SF3A2-207ENST00000592839 PUF60Q9UHX1 559 aaKnown RBP16.51■□□□□ 0.23
SF3A2-207ENST00000592839 A0A1B0GUA9 196 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 MEIS3P2A8K0S8 358 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 H3BQ06 376 aaPredicted RBP16.5■□□□□ 0.23
SF3A2-207ENST00000592839 MBTPS2O43462 519 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 SRGAP2CP0DJJ0 459 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 PLA2G5P39877 138 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
SF3A2-207ENST00000592839 KRT17Q04695 432 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 ZP2Q05996 745 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 PTGDRQ13258 359 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 CUL4AQ13619 759 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 NOMO2Q5JPE7 1267 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 TMEM31Q5JXX7 168 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 HYIQ5T013 277 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 SMG8Q8ND04 991 aaKnown RBP16.5■□□□□ 0.23
SF3A2-207ENST00000592839 KCNN1Q92952 543 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 CSRNP2Q9H175 543 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 FZD8Q9H461 694 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 RSAD1Q9HA92 442 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 PCDHB6Q9Y5E3 794 aa16.5■□□□□ 0.23
SF3A2-207ENST00000592839 SLC26A4O43511 780 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 ERLIN2O94905 339 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 GALTP07902 379 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-207ENST00000592839 GTF2F1P35269 517 aaKnown RBP eCLIP16.49■□□□□ 0.23
SF3A2-207ENST00000592839 NAMPTP43490 491 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 BCAR1P56945 870 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 DSC1Q08554 894 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 SPOUT1Q5T280 376 aaKnown RBP16.49■□□□□ 0.23
SF3A2-207ENST00000592839 ARL6IP4Q66PJ3 421 aaKnown RBP16.49■□□□□ 0.23
SF3A2-207ENST00000592839 ADHFE1Q8IWW8 467 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 RNF168Q8IYW5 571 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-207ENST00000592839 CCDC113Q9H0I3 377 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 ZBP1Q9H171 429 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 POLR3FQ9H1D9 316 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-207ENST00000592839 NRDE2Q9H7Z3 1164 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 CD320Q9NPF0 282 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 PRMT7Q9NVM4 692 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-207ENST00000592839 CD207Q9UJ71 328 aa16.49■□□□□ 0.23
SF3A2-207ENST00000592839 ARIH1Q9Y4X5 557 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-207ENST00000592839 TDRD15B5MCY1 1934 aaKnown RBP16.49■□□□□ 0.23
SF3A2-207ENST00000592839 PI4K2BG5E9Z4 385 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 LINC01565O15544 149 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 USO1O60763 962 aaKnown RBP16.48■□□□□ 0.23
SF3A2-207ENST00000592839 GPR37L1O60883 481 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 ALDH7A1P49419 539 aaKnown RBP16.48■□□□□ 0.23
SF3A2-207ENST00000592839 GNL2Q13823 731 aaKnown RBP16.48■□□□□ 0.23
SF3A2-207ENST00000592839 GIT2Q14161 759 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 ECM1Q16610 540 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 PADI6Q6TGC4 694 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 DDX53Q86TM3 631 aaKnown RBP16.48■□□□□ 0.23
SF3A2-207ENST00000592839 GJD3Q8N144 294 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 MRPL43Q8N983 215 aaKnown RBP16.48■□□□□ 0.23
SF3A2-207ENST00000592839 VN1R2Q8NFZ6 395 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 SUSD6Q92537 303 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 LPPQ93052 612 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 IGSF21Q96ID5 467 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 CCDC43Q96MW1 224 aaKnown RBP16.48■□□□□ 0.23
SF3A2-207ENST00000592839 TCF25Q9BQ70 676 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 C2orf40Q9H1Z8 148 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 BMP2KQ9NSY1 1161 aaPredicted RBP16.48■□□□□ 0.23
SF3A2-207ENST00000592839 LRWD1Q9UFC0 647 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 GIT1Q9Y2X7 761 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 HCN4Q9Y3Q4 1203 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 IPPQ9Y573 584 aa16.48■□□□□ 0.23
SF3A2-207ENST00000592839 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
SF3A2-207ENST00000592839 B4GALT3O60512 393 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 CTSAP10619 480 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 ATP2B1P20020 1258 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 GJB2P29033 226 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 NRIP1P48552 1158 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 NCBP1Q09161 790 aaKnown RBP16.47■□□□□ 0.23
SF3A2-207ENST00000592839 NBR1Q14596 966 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 CBX2Q14781 532 aaPredicted RBP16.47■□□□□ 0.23
SF3A2-207ENST00000592839 IL17AQ16552 155 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 SLC27A1Q6PCB7 646 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 TMEM173Q86WV6 379 aaPredicted RBP16.47■□□□□ 0.23
SF3A2-207ENST00000592839 GPR65Q8IYL9 337 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 URGCPQ8TCY9 931 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 KIFAP3Q92845 792 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 TMEM169Q96HH4 297 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 POP1Q99575 1024 aaKnown RBP16.47■□□□□ 0.23
SF3A2-207ENST00000592839 TLE6Q9H808 572 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 PCDHGC5Q9Y5F6 944 aa16.47■□□□□ 0.23
SF3A2-207ENST00000592839 C2orf71A6NGG8 1288 aa16.46■□□□□ 0.23
SF3A2-207ENST00000592839 INO80B-WBP1J3KQ70 363 aa16.46■□□□□ 0.23
SF3A2-207ENST00000592839 PAPLNO95428 1278 aa16.46■□□□□ 0.23
SF3A2-207ENST00000592839 C1RP00736 705 aa16.46■□□□□ 0.23
SF3A2-207ENST00000592839 HOXB8P17481 243 aaPredicted RBP16.46■□□□□ 0.23
SF3A2-207ENST00000592839 PBX3P40426 434 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms