RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 ADH1AP07327 375 aa22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 HMGB1P09429 215 aaKnown RBP22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 AGMOQ6ZNB7 445 aa22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 KIAA2013Q8IYS2 634 aa22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 RIN2Q8WYP3 895 aaPredicted RBP22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 PHKBQ93100 1093 aa22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 RMDN1Q96DB5 314 aa22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 HINFPQ9BQA5 517 aa22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 WDR6Q9NNW5 1121 aaKnown RBP22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 AGPAT5Q9NUQ2 364 aa22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 SSX2IPQ9Y2D8 614 aa22.02■■□□□ 1.12
PRKCSH-216ENST00000592445 EP300Q09472 2414 aaPredicted RBP22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 NRP1O14786 923 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 PSMD10O75832 226 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 STBD1O95210 358 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 POMCP01189 267 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 SOD2P04179 222 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 MYBP10242 640 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 AFF1P51825 1210 aaKnown RBP22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 TSGA10IPQ3SY00 556 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 SPECC1Q5M775 1068 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 DGLUCYQ7Z3D6 616 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 SLC44A3Q8N4M1 653 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 RPS6KC1Q96S38 1066 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 JPH2Q9BR39 696 aaPredicted RBP22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 TBC1D17Q9HA65 648 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 C2orf16Q68DN1 1984 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 CLUHO75153 1309 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 CNTNAP2Q9UHC6 1331 aa22.01■■□□□ 1.11
PRKCSH-216ENST00000592445 INPPL1O15357 1258 aa22■■□□□ 1.11
PRKCSH-216ENST00000592445 EDIL3O43854 480 aa22■■□□□ 1.11
PRKCSH-216ENST00000592445 GLUD1P00367 558 aa22■■□□□ 1.11
PRKCSH-216ENST00000592445 SRFP11831 508 aa22■■□□□ 1.11
PRKCSH-216ENST00000592445 CYP26C1Q6V0L0 522 aa22■■□□□ 1.11
PRKCSH-216ENST00000592445 NXPE3Q969Y0 559 aa22■■□□□ 1.11
PRKCSH-216ENST00000592445 VPS54Q9P1Q0 977 aa22■■□□□ 1.11
PRKCSH-216ENST00000592445 EPS15L1Q9UBC2 864 aa22■■□□□ 1.11
PRKCSH-216ENST00000592445 PRG3Q9Y2Y8 225 aaPredicted RBP22■■□□□ 1.11
PRKCSH-216ENST00000592445 TEX28O15482 410 aa21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 ZC3H14Q6PJT7 736 aaKnown RBP21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 Q6ZUG5 572 aa21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 MRPL10Q7Z7H8 261 aaKnown RBP21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 SMG7Q92540 1137 aaKnown RBP21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 MYADMQ96S97 322 aa21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 HERC2P3Q9BVR0 1158 aa21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 SLC26A6Q9BXS9 759 aa21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 PIDD1Q9HB75 910 aa21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 IFT122Q9HBG6 1241 aa21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 COL4A3BPQ9Y5P4 624 aa21.99■■□□□ 1.11
PRKCSH-216ENST00000592445 MED19A0JLT2 244 aaPredicted RBP21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 RFPL2O75678 378 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 DCNP07585 359 aaKnown RBP21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 SRGAP2CP0DJJ0 459 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 CPA1P15085 419 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 OR1G1P47890 313 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 GLUD2P49448 558 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 NLRP5P59047 1200 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 Q4G0T1 1027 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 PLA2G4FQ68DD2 849 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 ANO5Q75V66 913 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 TAS1R1Q7RTX1 841 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 TBCKQ8TEA7 893 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 BRF1Q92994 677 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 RHOBTB2Q9BYZ6 727 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 SIT1Q9Y3P8 196 aa21.98■■□□□ 1.11
PRKCSH-216ENST00000592445 SPATA31D3P0C874 917 aa21.97■■□□□ 1.11
PRKCSH-216ENST00000592445 PSMC5P62195 406 aa21.97■■□□□ 1.11
PRKCSH-216ENST00000592445 SPATA31D4Q6ZUB0 917 aa21.97■■□□□ 1.11
PRKCSH-216ENST00000592445 GPR152Q8TDT2 470 aa21.97■■□□□ 1.11
PRKCSH-216ENST00000592445 SLC7A3Q8WY07 619 aa21.97■■□□□ 1.11
PRKCSH-216ENST00000592445 RNF26Q9BY78 433 aaPredicted RBP21.97■■□□□ 1.11
PRKCSH-216ENST00000592445 MARCH5Q9NX47 278 aa21.97■■□□□ 1.11
PRKCSH-216ENST00000592445 DNAH14Q0VDD8 3507 aa21.96■■□□□ 1.11
PRKCSH-216ENST00000592445 TDP2O95551 362 aa21.96■■□□□ 1.11
PRKCSH-216ENST00000592445 PHLDB3Q6NSJ2 640 aa21.96■■□□□ 1.11
PRKCSH-216ENST00000592445 SRGAP1Q7Z6B7 1085 aa21.96■■□□□ 1.11
PRKCSH-216ENST00000592445 C22orf23Q9BZE7 217 aa21.96■■□□□ 1.11
PRKCSH-216ENST00000592445 UBN1Q9NPG3 1134 aa21.96■■□□□ 1.11
PRKCSH-216ENST00000592445 ARHGEF3Q9NR81 526 aa21.96■■□□□ 1.11
PRKCSH-216ENST00000592445 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.96■■□□□ 1.11
PRKCSH-216ENST00000592445 ITGA4P13612 1032 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 NCLP19338 710 aaKnown RBP21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 IRX6P78412 446 aaPredicted RBP21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 PUM1Q14671 1186 aaKnown RBP eCLIP21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 UBXN11Q5T124 520 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 KIAA0319Q5VV43 1072 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 B3GNT9Q6UX72 402 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 GET4Q7L5D6 327 aaPredicted RBP21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 PALB2Q86YC2 1186 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 C1orf210Q8IVY1 113 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 CNNM3Q8NE01 707 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 PRPF31Q8WWY3 499 aaKnown RBP21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 PSPC1Q8WXF1 523 aaKnown RBP21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 TMEM143Q96AN5 459 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 MINDY3Q9H8M7 445 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 RXFP1Q9HBX9 757 aa21.95■■□□□ 1.1
PRKCSH-216ENST00000592445 CYP3A7-CYP3A51PA0A087WV96 503 aa21.94■■□□□ 1.1
PRKCSH-216ENST00000592445 GAS2O43903 313 aaKnown RBP21.94■■□□□ 1.1
PRKCSH-216ENST00000592445 NR1I2O75469 434 aa21.94■■□□□ 1.1
PRKCSH-216ENST00000592445 SP9P0CG40 484 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms