RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 VAV3Q9UKW4 847 aa20.5■□□□□ 0.87
CIRBP-238ENST00000592412 CACNA1AO00555 2505 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 SSBP05455 408 aaKnown RBP eCLIP20.49■□□□□ 0.87
CIRBP-238ENST00000592412 PSMC5P62195 406 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 CENPQQ7L2Z9 268 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-238ENST00000592412 FRMD5Q7Z6J6 570 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 PPFIBP1Q86W92 1011 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 BLIDQ8IZY5 108 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 TMEM87AQ8NBN3 555 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 DAGLBQ8NCG7 672 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 RSAD1Q9HA92 442 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 MARCH5Q9NX47 278 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 COL4A3BPQ9Y5P4 624 aa20.49■□□□□ 0.87
CIRBP-238ENST00000592412 EFEMP2O95967 443 aa20.48■□□□□ 0.87
CIRBP-238ENST00000592412 KLRC2P26717 231 aa20.48■□□□□ 0.87
CIRBP-238ENST00000592412 CCDC149Q6ZUS6 474 aa20.48■□□□□ 0.87
CIRBP-238ENST00000592412 TAS1R1Q7RTX1 841 aa20.48■□□□□ 0.87
CIRBP-238ENST00000592412 PGBD4Q96DM1 585 aa20.48■□□□□ 0.87
CIRBP-238ENST00000592412 MFSD1Q9H3U5 465 aa20.48■□□□□ 0.87
CIRBP-238ENST00000592412 DHX33Q9H6R0 707 aaKnown RBP20.48■□□□□ 0.87
CIRBP-238ENST00000592412 KCNK12Q9HB15 430 aa20.48■□□□□ 0.87
CIRBP-238ENST00000592412 NRP1O14786 923 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 POMCP01189 267 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 AOC1P19801 751 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 PPP2R5CQ13362 524 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 TDGQ13569 410 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 INF2Q27J81 1249 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 OTOP3Q7RTS5 596 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 SMG8Q8ND04 991 aaKnown RBP20.47■□□□□ 0.87
CIRBP-238ENST00000592412 FLCNQ8NFG4 579 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 URGCPQ8TCY9 931 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 PRPF31Q8WWY3 499 aaKnown RBP20.47■□□□□ 0.87
CIRBP-238ENST00000592412 TMEM143Q96AN5 459 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 ACSF2Q96CM8 615 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-238ENST00000592412 TMEM175Q9BSA9 504 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 EMILIN2Q9BXX0 1053 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 KCNMB3Q9NPA1 279 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 DDX25Q9UHL0 483 aaKnown RBP20.47■□□□□ 0.87
CIRBP-238ENST00000592412 DUSP12Q9UNI6 340 aa20.47■□□□□ 0.87
CIRBP-238ENST00000592412 QARSP47897 775 aaKnown RBP20.46■□□□□ 0.87
CIRBP-238ENST00000592412 SSRP1Q08945 709 aaKnown RBP20.46■□□□□ 0.87
CIRBP-238ENST00000592412 LETM2Q2VYF4 491 aa20.46■□□□□ 0.87
CIRBP-238ENST00000592412 C15orf39Q6ZRI6 1047 aa20.46■□□□□ 0.87
CIRBP-238ENST00000592412 RNF168Q8IYW5 571 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-238ENST00000592412 JPH2Q9BR39 696 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-238ENST00000592412 BMP2KQ9NSY1 1161 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-238ENST00000592412 F8W810 466 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 NARSO43776 548 aaKnown RBP20.45■□□□□ 0.86
CIRBP-238ENST00000592412 DEXIO95424 95 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 SOD2P04179 222 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 SRGAP2CP0DJJ0 459 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 NCLP19338 710 aaKnown RBP20.45■□□□□ 0.86
CIRBP-238ENST00000592412 LAMTOR4Q0VGL1 99 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 NONOQ15233 471 aaKnown RBP eCLIP20.45■□□□□ 0.86
CIRBP-238ENST00000592412 SRGAP1Q7Z6B7 1085 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 TRIM22Q8IYM9 498 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 CMASQ8NFW8 434 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-238ENST00000592412 SLC7A3Q8WY07 619 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 CEP170P1Q96L14 293 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 LARP6Q9BRS8 491 aaKnown RBP20.45■□□□□ 0.86
CIRBP-238ENST00000592412 RNF39Q9H2S5 420 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 MAN1C1Q9NR34 630 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 MRPL17Q9NRX2 175 aaKnown RBP20.45■□□□□ 0.86
CIRBP-238ENST00000592412 STK39Q9UEW8 545 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 FAN1Q9Y2M0 1017 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 CNTNAP2Q9UHC6 1331 aa20.45■□□□□ 0.86
CIRBP-238ENST00000592412 C2CD2LO14523 706 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 INPPL1O15357 1258 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 TEX28O15482 410 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 ALDH2P05091 517 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 PSMA5P28066 241 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 RUFY3Q7L099 469 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 CCDC105Q8IYK2 499 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 COLGALT2Q8IYK4 626 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 PSPC1Q8WXF1 523 aaKnown RBP20.44■□□□□ 0.86
CIRBP-238ENST00000592412 RSAD2Q8WXG1 361 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 HAS1Q92839 578 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 RPS6KC1Q96S38 1066 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 HERC2P3Q9BVR0 1158 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 EIF2AQ9BY44 585 aaKnown RBP20.44■□□□□ 0.86
CIRBP-238ENST00000592412 ZSWIM6Q9HCJ5 1215 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 KANSL3Q9P2N6 904 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 KCNJ14Q9UNX9 436 aa20.44■□□□□ 0.86
CIRBP-238ENST00000592412 PRG3Q9Y2Y8 225 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-238ENST00000592412 EP300Q09472 2414 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-238ENST00000592412 ARID2Q68CP9 1835 aa20.43■□□□□ 0.86
CIRBP-238ENST00000592412 ZBTB39O15060 712 aa20.43■□□□□ 0.86
CIRBP-238ENST00000592412 P4HBP07237 508 aaKnown RBP20.43■□□□□ 0.86
CIRBP-238ENST00000592412 DSC1Q08554 894 aa20.43■□□□□ 0.86
CIRBP-238ENST00000592412 KIAA0319Q5VV43 1072 aa20.43■□□□□ 0.86
CIRBP-238ENST00000592412 SIX5Q8N196 739 aa20.43■□□□□ 0.86
CIRBP-238ENST00000592412 NKD2Q969F2 451 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-238ENST00000592412 LXNQ9BS40 222 aa20.43■□□□□ 0.86
CIRBP-238ENST00000592412 MIOSQ9NXC5 875 aa20.43■□□□□ 0.86
CIRBP-238ENST00000592412 IPPQ9Y573 584 aa20.43■□□□□ 0.86
CIRBP-238ENST00000592412 SPDYE4A6NLX3 237 aa20.42■□□□□ 0.86
CIRBP-238ENST00000592412 RFPL2O75678 378 aa20.42■□□□□ 0.86
CIRBP-238ENST00000592412 PAPLNO95428 1278 aa20.42■□□□□ 0.86
CIRBP-238ENST00000592412 MYBP10242 640 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms