RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 NR2E1Q9Y466 385 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.32□□□□□ -0.6
VMP1-214ENST00000592106 HIDE1A8MVS5 230 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 EML1O00423 815 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 CSDE1O75534 798 aaKnown RBP11.32□□□□□ -0.6
VMP1-214ENST00000592106 ERLIN2O94905 339 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 YWHABP31946 246 aaKnown RBP11.32□□□□□ -0.6
VMP1-214ENST00000592106 ITIH3Q06033 890 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 NCBP1Q09161 790 aaKnown RBP11.32□□□□□ -0.6
VMP1-214ENST00000592106 DSG2Q14126 1118 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 TFDP1Q14186 410 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 EMC2Q15006 297 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 PCBP1Q15365 356 aaKnown RBP eCLIP11.32□□□□□ -0.6
VMP1-214ENST00000592106 XKR9Q5GH70 373 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 CNNM3Q8NE01 707 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 VN1R2Q8NFZ6 395 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 RIPOR3Q96MK2 946 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 FAM193BQ96PV7 902 aaPredicted RBP11.32□□□□□ -0.6
VMP1-214ENST00000592106 MTRQ99707 1265 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 PRRX2Q99811 253 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 DHX33Q9H6R0 707 aaKnown RBP11.32□□□□□ -0.6
VMP1-214ENST00000592106 KANSL3Q9P2N6 904 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 TPCN1Q9ULQ1 816 aa11.32□□□□□ -0.6
VMP1-214ENST00000592106 TMEM221A6NGB7 291 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 C2orf71A6NGG8 1288 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 NT5C1B-RDH14C9J2C7 533 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 M0R296 226 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 ZNF623O75123 536 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 CXCL14O95715 111 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 MTHFRP42898 656 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 AK2P54819 239 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 NPEPPSP55786 919 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 ZXDAP98168 799 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 KCNC3Q14003 757 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 MXD4Q14582 209 aaPredicted RBP11.31□□□□□ -0.6
VMP1-214ENST00000592106 PPP1R15BQ5SWA1 713 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 TRIM67Q6ZTA4 783 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 HFE2Q6ZVN8 426 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 BMP8AQ7Z5Y6 402 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 PPFIBP1Q86W92 1011 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 PLPP6Q8IY26 295 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 HACE1Q8IYU2 909 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 VPS52Q8N1B4 723 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 MRPL43Q8N983 215 aaKnown RBP11.31□□□□□ -0.6
VMP1-214ENST00000592106 LPPQ93052 612 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 CCDC51Q96ER9 411 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 DYDC2Q96IM9 177 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 ZBP1Q9H171 429 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 UBN1Q9NPG3 1134 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 TBC1D13Q9NVG8 400 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 HCFC2Q9Y5Z7 792 aa11.31□□□□□ -0.6
VMP1-214ENST00000592106 NEMFO60524 1076 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 CLASP2O75122 1294 aaKnown RBP11.3□□□□□ -0.6
VMP1-214ENST00000592106 SRGAP2CP0DJJ0 459 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 CTSAP10619 480 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 AXLP30530 894 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 RBM10P98175 930 aaKnown RBP11.3□□□□□ -0.6
VMP1-214ENST00000592106 CYP4A11Q02928 519 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 SIGLEC14Q08ET2 396 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 LAMTOR4Q0VGL1 99 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 CALCRLQ16602 461 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 PTPN21Q16825 1174 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 LONRF3Q496Y0 759 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 NOTUMQ6P988 496 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 SYCE2Q6PIF2 218 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 ELMSAN1Q6PJG2 1045 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 DDX53Q86TM3 631 aaKnown RBP11.3□□□□□ -0.6
VMP1-214ENST00000592106 FERMT3Q86UX7 667 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 KSR1Q8IVT5 923 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 RNF149Q8NC42 400 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 PRPF31Q8WWY3 499 aaKnown RBP11.3□□□□□ -0.6
VMP1-214ENST00000592106 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 TMEM143Q96AN5 459 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 PBXIP1Q96AQ6 731 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 IGSF21Q96ID5 467 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 TMEM175Q9BSA9 504 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 APOL5Q9BWW9 433 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 EMILIN2Q9BXX0 1053 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 S1PR5Q9H228 398 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 NRDE2Q9H7Z3 1164 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 PPP4R2Q9NY27 417 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 SSX2IPQ9Y2D8 614 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 PCDHB2Q9Y5E7 798 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 IRAK3Q9Y616 596 aa11.3□□□□□ -0.6
VMP1-214ENST00000592106 NR1I2O75469 434 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 OFD1O75665 1012 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 DGAT1O75907 488 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 GALTP07902 379 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 ITGA4P13612 1032 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 NR5A1Q13285 461 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 CTTNQ14247 550 aaKnown RBP11.29□□□□□ -0.6
VMP1-214ENST00000592106 SAFBQ15424 915 aaKnown RBP eCLIP11.29□□□□□ -0.6
VMP1-214ENST00000592106 KIAA1841Q6NSI8 718 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 TPH2Q8IWU9 490 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 TDRD5Q8NAT2 981 aaKnown RBP11.29□□□□□ -0.6
VMP1-214ENST00000592106 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 HAS1Q92839 578 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms