RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 A0A1B0GUA9 196 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 FGF18O76093 207 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 CSPG5O95196 566 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 LAG3P18627 525 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 NCLP19338 710 aaKnown RBP24.71■■□□□ 1.55
MBD3-208ENST00000590830 MARCKSP29966 332 aaPredicted RBP24.71■■□□□ 1.55
MBD3-208ENST00000590830 IRS1P35568 1242 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 SLC12A3P55017 1021 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 FAM187BQ17R55 369 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 KCNT2Q6UVM3 1135 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 USP49Q70CQ1 688 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 KCTD17Q8N5Z5 321 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 SPRYD3Q8NCJ5 442 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 ATXN2LQ8WWM7 1075 aaKnown RBP24.71■■□□□ 1.55
MBD3-208ENST00000590830 PGBD4Q96DM1 585 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 CCDC51Q96ER9 411 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 USP28Q96RU2 1077 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 ZSCAN16Q9H4T2 348 aaPredicted RBP24.71■■□□□ 1.55
MBD3-208ENST00000590830 FBXO2Q9UK22 296 aaPredicted RBP24.71■■□□□ 1.55
MBD3-208ENST00000590830 HES2Q9Y543 173 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 IPPQ9Y573 584 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 MYO7AQ13402 2215 aa24.71■■□□□ 1.55
MBD3-208ENST00000590830 HIP1RO75146 1068 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 PLA2G4BP0C869 781 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 UBA7P41226 1012 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 NCBP1Q09161 790 aaKnown RBP24.7■■□□□ 1.54
MBD3-208ENST00000590830 TIGD5Q53EQ6 642 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 NOMO2Q5JPE7 1267 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 SPECC1Q5M775 1068 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 GLB1LQ6UWU2 654 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 ZBTB8OSQ8IWT0 167 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 ASB2Q96Q27 587 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 NT5C3AQ9H0P0 336 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 C2orf40Q9H1Z8 148 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 NSUN3Q9H649 340 aaKnown RBP24.7■■□□□ 1.54
MBD3-208ENST00000590830 TBC1D13Q9NVG8 400 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 PRMT7Q9NVM4 692 aaPredicted RBP24.7■■□□□ 1.54
MBD3-208ENST00000590830 INPP5FQ9Y2H2 1132 aa24.7■■□□□ 1.54
MBD3-208ENST00000590830 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.69■■□□□ 1.54
MBD3-208ENST00000590830 SFI1A8K8P3 1242 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 SLC26A4O43511 780 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 B4GALT3O60512 393 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 SSBP05455 408 aaKnown RBP eCLIP24.69■■□□□ 1.54
MBD3-208ENST00000590830 KARSQ15046 597 aaKnown RBP24.69■■□□□ 1.54
MBD3-208ENST00000590830 PPP2R5AQ15172 486 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 ARSHQ5FYA8 562 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 THNSL1Q8IYQ7 743 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 DEPTORQ8TB45 409 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 HLA-CQ95604 372 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 EPSTI1Q96J88 318 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 CDK5RAP3Q96JB5 506 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 IFT74Q96LB3 600 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 CLIC6Q96NY7 704 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 BLOC1S4Q9NUP1 217 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 COG5Q9UP83 839 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 PCDHGC5Q9Y5F6 944 aa24.69■■□□□ 1.54
MBD3-208ENST00000590830 SRPRBQ9Y5M8 271 aaKnown RBP24.69■■□□□ 1.54
MBD3-208ENST00000590830 NPHP3-ACAD11A0A0J9YXS1 232 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 GUCY2CP25092 1073 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 NPTX2P47972 431 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 PEX3P56589 373 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 BCAR1P56945 870 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 MRPS5P82675 430 aaKnown RBP24.68■■□□□ 1.54
MBD3-208ENST00000590830 PLCB3Q01970 1234 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 RAD51AP2Q09MP3 1159 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 FOXD4L5Q5VV16 416 aaPredicted RBP24.68■■□□□ 1.54
MBD3-208ENST00000590830 ZNF280BQ86YH2 543 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 CNNM3Q8NE01 707 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 FOXD4L4Q8WXT5 416 aaPredicted RBP24.68■■□□□ 1.54
MBD3-208ENST00000590830 PRIMPOLQ96LW4 560 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 ZNF558Q96NG5 402 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 MRPL9Q9BYD2 267 aaKnown RBP24.68■■□□□ 1.54
MBD3-208ENST00000590830 NRDE2Q9H7Z3 1164 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 RSAD1Q9HA92 442 aa24.68■■□□□ 1.54
MBD3-208ENST00000590830 CNTNAP2Q9UHC6 1331 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 NT5C1B-RDH14C9J2C7 533 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 ACKR2O00590 384 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 NPTXRO95502 500 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 PRKCBP05771 671 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 ITGA4P13612 1032 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 LIG1P18858 919 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 ERVFC1P60507 584 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 HYAL1Q12794 435 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 COL19A1Q14993 1142 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 SLC39A14Q15043 492 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 MAPK6Q16659 721 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 CSPP1Q1MSJ5 1256 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 NT5DC1Q5TFE4 455 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 SLC27A1Q6PCB7 646 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 SLC39A11Q8N1S5 342 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 CALML4Q96GE6 196 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 COL25A1Q9BXS0 654 aaPredicted RBP24.67■■□□□ 1.54
MBD3-208ENST00000590830 CCSER1Q9C0I3 900 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 NXF3Q9H4D5 531 aaKnown RBP24.67■■□□□ 1.54
MBD3-208ENST00000590830 PDZD7Q9H5P4 517 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 MIOSQ9NXC5 875 aa24.67■■□□□ 1.54
MBD3-208ENST00000590830 DDHD2O94830 711 aa24.66■■□□□ 1.54
MBD3-208ENST00000590830 HSP90AA1P07900 732 aaKnown RBP24.66■■□□□ 1.54
MBD3-208ENST00000590830 PLCG1P19174 1290 aa24.66■■□□□ 1.54
MBD3-208ENST00000590830 GTF2F1P35269 517 aaKnown RBP eCLIP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms