RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 CD4P01730 458 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 DARSP14868 501 aaKnown RBP16.64■□□□□ 0.25
DDX39A-211ENST00000590239 PMS1P54277 932 aaKnown RBP16.64■□□□□ 0.25
DDX39A-211ENST00000590239 STX17P56962 302 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 MBTD1Q05BQ5 628 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 RBL2Q08999 1139 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 TMEM62Q0P6H9 643 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 NFIL3Q16649 462 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 FAM26DQ5JW98 314 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 NECAB2Q7Z6G3 386 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 DHX40Q8IX18 779 aaKnown RBP16.64■□□□□ 0.25
DDX39A-211ENST00000590239 DIS3LQ8TF46 1054 aaKnown RBP16.64■□□□□ 0.25
DDX39A-211ENST00000590239 TMEM174Q8WUU8 243 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 DHX38Q92620 1227 aaKnown RBP16.64■□□□□ 0.25
DDX39A-211ENST00000590239 WNT8BQ93098 351 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 TOX2Q96NM4 488 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 DUSP9Q99956 384 aaKnown RBP16.64■□□□□ 0.25
DDX39A-211ENST00000590239 PRMT7Q9NVM4 692 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-211ENST00000590239 TRPV2Q9Y5S1 764 aa16.64■□□□□ 0.25
DDX39A-211ENST00000590239 SIP14410 1827 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 INO80B-WBP1J3KQ70 363 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 ACKR2O00590 384 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 PRKCBP05771 671 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 EIF4BP23588 611 aaKnown RBP16.63■□□□□ 0.25
DDX39A-211ENST00000590239 THPOP40225 353 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 MYBPC2Q14324 1141 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 NCAPHQ15003 741 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 PRPF38BQ5VTL8 546 aaKnown RBP16.63■□□□□ 0.25
DDX39A-211ENST00000590239 ZPBP2Q6X784 338 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 LUZP1Q86V48 1076 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 C12orf56Q8IXR9 622 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 CCDC155Q8N6L0 562 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 RNF214Q8ND24 703 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 NOC3LQ8WTT2 800 aaKnown RBP16.63■□□□□ 0.25
DDX39A-211ENST00000590239 PAWRQ96IZ0 340 aaKnown RBP16.63■□□□□ 0.25
DDX39A-211ENST00000590239 ZNF668Q96K58 619 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-211ENST00000590239 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 PPP1R16BQ96T49 567 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 MRPL4Q9BYD3 311 aaKnown RBP16.63■□□□□ 0.25
DDX39A-211ENST00000590239 MINDY3Q9H8M7 445 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 CDHR5Q9HBB8 845 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 AGPAT3Q9NRZ7 376 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 NFE2L3Q9Y4A8 694 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 CDY2AQ9Y6F7 541 aa16.63■□□□□ 0.25
DDX39A-211ENST00000590239 TRIM49BA6NDI0 452 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 DCDC2CA8MYV0 355 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 GOLGA6L19H0YKK7 550 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
DDX39A-211ENST00000590239 FGFR1OPO95684 399 aaKnown RBP16.62■□□□□ 0.25
DDX39A-211ENST00000590239 CHRNA1P02708 482 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 RPL13P26373 211 aaKnown RBP16.62■□□□□ 0.25
DDX39A-211ENST00000590239 TPM4P67936 248 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 FKBP3Q00688 224 aaKnown RBP16.62■□□□□ 0.25
DDX39A-211ENST00000590239 MGAT3Q09327 533 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 PRPF4BQ13523 1007 aaKnown RBP16.62■□□□□ 0.25
DDX39A-211ENST00000590239 GSE1Q14687 1217 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 TPD52L1Q16890 204 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-211ENST00000590239 SLC9A9Q8IVB4 645 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 ZC3H3Q8IXZ2 948 aaKnown RBP16.62■□□□□ 0.25
DDX39A-211ENST00000590239 CSGALNACT2Q8N6G5 542 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 CAGE1Q8TC20 777 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 BICD1Q96G01 975 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 OSMRQ99650 979 aa16.62■□□□□ 0.25
DDX39A-211ENST00000590239 KIAA0100Q14667 2235 aaKnown RBP16.62■□□□□ 0.25
DDX39A-211ENST00000590239 FSD2A1L4K1 749 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 PQBP1O60828 265 aaKnown RBP16.61■□□□□ 0.25
DDX39A-211ENST00000590239 NR3C1P04150 777 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 IQCF3P0C7M6 154 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 LIG4P49917 911 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 ATN1P54259 1190 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-211ENST00000590239 BFSP2Q13515 415 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 AMHR2Q16671 573 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 SLFN12LQ6IEE8 588 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 CEP63Q96MT8 703 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 THAP9Q9H5L6 903 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 DMAC2Q9NW81 257 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 GINS2Q9Y248 185 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 STYXL1Q9Y6J8 313 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 CNTNAP2Q9UHC6 1331 aa16.61■□□□□ 0.25
DDX39A-211ENST00000590239 GOLGA6L3A6NEY3 463 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 ANKRD63C9JTQ0 380 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 KIAA0391O15091 583 aaKnown RBP16.6■□□□□ 0.25
DDX39A-211ENST00000590239 CETN3O15182 167 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 ERLIN2O94905 339 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 CKBP12277 381 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 GARTP22102 1010 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX39A-211ENST00000590239 TLE2Q04725 743 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 NCBP1Q09161 790 aaKnown RBP16.6■□□□□ 0.25
DDX39A-211ENST00000590239 HSP90AA2PQ14568 343 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-211ENST00000590239 UVSSAQ2YD98 709 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 TRIM60Q495X7 471 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 SLC39A4Q6P5W5 647 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 LRRC55Q6ZSA7 311 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 TSHZ1Q6ZSZ6 1077 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 UBE2Q1Q7Z7E8 422 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 USP38Q8NB14 1042 aa16.6■□□□□ 0.25
DDX39A-211ENST00000590239 ACO2Q99798 780 aaKnown RBP16.6■□□□□ 0.25
DDX39A-211ENST00000590239 TARS2Q9BW92 718 aaKnown RBP16.6■□□□□ 0.25
DDX39A-211ENST00000590239 SRRTQ9BXP5 876 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms