RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PSMA2P25787 234 aa15.53■□□□□ 0.08
SMARCA4-214ENST00000589677 KIF22Q14807 665 aa15.53■□□□□ 0.08
SMARCA4-214ENST00000589677 TXNRD1Q16881 649 aa15.53■□□□□ 0.08
SMARCA4-214ENST00000589677 KIF19Q2TAC6 998 aa15.53■□□□□ 0.08
SMARCA4-214ENST00000589677 MFN1Q8IWA4 741 aa15.53■□□□□ 0.08
SMARCA4-214ENST00000589677 ATP6V0A1Q93050 837 aa15.53■□□□□ 0.08
SMARCA4-214ENST00000589677 COA7Q96BR5 231 aa15.53■□□□□ 0.08
SMARCA4-214ENST00000589677 MAML3Q96JK9 1138 aa15.53■□□□□ 0.08
SMARCA4-214ENST00000589677 HSPA13P48723 471 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 TRIP10Q15642 601 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 ERICH1Q86X53 443 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 JAMLQ86YT9 394 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 GLYCTKQ8IVS8 523 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 C1orf54Q8WWF1 131 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 CMTM5Q96DZ9 223 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 SERPINB12Q96P63 405 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 CARD9Q9H257 536 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 PDS5AQ29RF7 1337 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 USP6P35125 1406 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 PDE5AO76074 875 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 RHOBTB3O94955 611 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 CCDC159P0C7I6 412 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 ICA1Q05084 483 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 ITKQ08881 620 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 CERKLQ49MI3 558 aaPredicted RBP15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 PBXIP1Q96AQ6 731 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 INTS2Q9H0H0 1204 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 GID8Q9NWU2 228 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 ETAA1Q9NY74 926 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 ROBO2Q9HCK4 1378 aa15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 NPHP4O75161 1426 aaPredicted RBP15.52■□□□□ 0.08
SMARCA4-214ENST00000589677 GOLGA8MH3BSY2 632 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 ADCY3O60266 1144 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 DHX38Q92620 1227 aaKnown RBP15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 PSMC3IPQ9P2W1 217 aaPredicted RBP15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 PNMA6FA0A0J9YX94 578 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 SERPINB2P05120 415 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 CALB1P05937 261 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 SLC1A1P43005 524 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 ALDH18A1P54886 795 aaKnown RBP15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 TBCCQ15814 346 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 TRAPPC3LQ5T215 181 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 SWT1Q5T5J6 900 aaKnown RBP15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 STOX1Q6ZVD7 989 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 CASKIN2Q8WXE0 1202 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 BHMT2Q9H2M3 363 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 DDX56Q9NY93 547 aaKnown RBP15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 TRPM1Q7Z4N2 1603 aa15.52■□□□□ 0.07
SMARCA4-214ENST00000589677 B2RBV5 119 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 RPS6KA5O75582 802 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 AARSP49588 968 aaKnown RBP eCLIP15.51■□□□□ 0.073e-6■□□□□ 9.5
SMARCA4-214ENST00000589677 ARHGAP22Q7Z5H3 698 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 SFR1Q86XK3 245 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 SYN2Q92777 582 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 ATP6V1E2Q96A05 226 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 CCSER1Q9C0I3 900 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 GNPATO15228 680 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 TMCC1O94876 653 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 TCP10Q12799 353 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 DDX17Q92841 729 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 MED10Q9BTT4 135 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 THTPAQ9BU02 230 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 ZWILCHQ9H900 591 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 SMARCAL1Q9NZC9 954 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 H7C1W4 665 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 STRNO43815 780 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 HP1BP3Q5SSJ5 553 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 MDM1Q8TC05 714 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 NRBP2Q9NSY0 501 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 IP6K2Q9UHH9 426 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 ANGPTL3Q9Y5C1 460 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 SASH3O75995 380 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 LRRC36Q1X8D7 754 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 C15orf41Q9Y2V0 281 aa15.51■□□□□ 0.07
SMARCA4-214ENST00000589677 ASAP2O43150 1006 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 HIF1AQ16665 826 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 CYFIP1Q7L576 1253 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 TMC4Q7Z404 712 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 VPS39Q96JC1 886 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 CCT7Q99832 543 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 CCDC90BQ9GZT6 254 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 VPS11Q9H270 941 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 SUCLA2Q9P2R7 463 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 C16orf96A6NNT2 1141 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 H0Y626 953 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 E2F6O75461 281 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 TRIM16O95361 564 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 USP11P51784 963 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 RASGRF1Q13972 1273 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 SNRNP27Q8WVK2 155 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 ANKS1AQ92625 1134 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 OSBPL8Q9BZF1 889 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 PABPC3Q9H361 631 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 SLC38A10Q9HBR0 1119 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 PICK1Q9NRD5 415 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 UNC13BO14795 1591 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 CPDO75976 1380 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 KAT6BQ8WYB5 2073 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 RCN1Q15293 331 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 SURF1Q15526 300 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms