RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 CLIC2O15247 247 aa27.14■■□□□ 1.93
RFX1-205ENST00000589239 CALUO43852 315 aaPredicted RBP27.14■■□□□ 1.93
RFX1-205ENST00000589239 GPR32O75388 356 aa27.14■■□□□ 1.93
RFX1-205ENST00000589239 EDN1P05305 212 aa27.14■■□□□ 1.93
RFX1-205ENST00000589239 ATP1A3P13637 1013 aa27.14■■□□□ 1.93
RFX1-205ENST00000589239 MNX1P50219 401 aaPredicted RBP27.14■■□□□ 1.93
RFX1-205ENST00000589239 PTPN11Q06124 597 aaPredicted RBP27.14■■□□□ 1.93
RFX1-205ENST00000589239 PPP4R3CPQ6ZMV5 832 aa27.14■■□□□ 1.93
RFX1-205ENST00000589239 HS2ST1Q7LGA3 356 aa27.14■■□□□ 1.93
RFX1-205ENST00000589239 NFKBIZQ9BYH8 718 aa27.14■■□□□ 1.93
RFX1-205ENST00000589239 AGPAT3Q9NRZ7 376 aa27.14■■□□□ 1.93
RFX1-205ENST00000589239 EXOC7Q9UPT5 735 aa27.14■■□□□ 1.93
RFX1-205ENST00000589239 INO80B-WBP1J3KQ70 363 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 SCP2P22307 547 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 ABCD1P33897 745 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 PHKA2P46019 1235 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 TPM4P67936 248 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 POU5F1BQ06416 359 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 FOXR2Q6PJQ5 311 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 INO80BQ9C086 356 aaPredicted RBP27.13■■□□□ 1.93
RFX1-205ENST00000589239 ADAMTS10Q9H324 1103 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 CDHR5Q9HBB8 845 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 IQCF3P0C7M6 154 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 GJA8P48165 433 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 MBTD1Q05BQ5 628 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 UVSSAQ2YD98 709 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 EDRF1Q3B7T1 1238 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 ZNF410Q86VK4 478 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 NOD1Q9Y239 953 aa27.13■■□□□ 1.93
RFX1-205ENST00000589239 ARVCFO00192 962 aa27.12■■□□□ 1.93
RFX1-205ENST00000589239 HNRNPDLO14979 420 aaKnown RBP27.12■■□□□ 1.93
RFX1-205ENST00000589239 ZNF18P17022 549 aa27.12■■□□□ 1.93
RFX1-205ENST00000589239 NR2F2P24468 414 aa27.12■■□□□ 1.93
RFX1-205ENST00000589239 FKBP3Q00688 224 aaKnown RBP27.12■■□□□ 1.93
RFX1-205ENST00000589239 PLCB2Q00722 1185 aa27.12■■□□□ 1.93
RFX1-205ENST00000589239 MAPK6Q16659 721 aa27.12■■□□□ 1.93
RFX1-205ENST00000589239 LRRC55Q6ZSA7 311 aa27.12■■□□□ 1.93
RFX1-205ENST00000589239 NME8Q8N427 588 aa27.12■■□□□ 1.93
RFX1-205ENST00000589239 BICD1Q96G01 975 aa27.12■■□□□ 1.93
RFX1-205ENST00000589239 OSMRQ99650 979 aa27.12■■□□□ 1.93
RFX1-205ENST00000589239 SENP6Q9GZR1 1112 aaPredicted RBP27.12■■□□□ 1.93
RFX1-205ENST00000589239 ANKRD63C9JTQ0 380 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 CDKAL1Q5VV42 579 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 TRPV6Q9H1D0 765 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 TTLL13PA6NNM8 815 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 RBAK-RBAKDNI3L0D1 243 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 B4GALT4O60513 344 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 NR3C1P04150 777 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 PRKCBP05771 671 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 CDC42EP1Q00587 391 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 ADAM9Q13443 819 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 SLC39A4Q6P5W5 647 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 IFNLR1Q8IU57 520 aaPredicted RBP27.11■■□□□ 1.93
RFX1-205ENST00000589239 IRF2BP1Q8IU81 584 aa27.11■■□□□ 1.93
RFX1-205ENST00000589239 KIAA0100Q14667 2235 aaKnown RBP27.1■■□□□ 1.93
RFX1-205ENST00000589239 CREBRFQ8IUR6 639 aa27.1■■□□□ 1.93
RFX1-205ENST00000589239 GOLGA5Q8TBA6 731 aa27.1■■□□□ 1.93
RFX1-205ENST00000589239 TARS2Q9BW92 718 aaKnown RBP27.1■■□□□ 1.93
RFX1-205ENST00000589239 FZD8Q9H461 694 aa27.1■■□□□ 1.93
RFX1-205ENST00000589239 AP5Z1O43299 807 aa27.1■■□□□ 1.93
RFX1-205ENST00000589239 DIS3LQ8TF46 1054 aaKnown RBP27.1■■□□□ 1.93
RFX1-205ENST00000589239 CBWD1Q9BRT8 395 aa27.1■■□□□ 1.93
RFX1-205ENST00000589239 THAP9Q9H5L6 903 aa27.1■■□□□ 1.93
RFX1-205ENST00000589239 SIP14410 1827 aa27.09■■□□□ 1.93
RFX1-205ENST00000589239 CDK11BP21127 795 aaKnown RBP27.09■■□□□ 1.93
RFX1-205ENST00000589239 ADSSP30520 456 aa27.09■■□□□ 1.93
RFX1-205ENST00000589239 LIG4P49917 911 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 CDK7P50613 346 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 RSPH3Q86UC2 560 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 ZC3H3Q8IXZ2 948 aaKnown RBP27.08■■□□□ 1.93
RFX1-205ENST00000589239 NOC3LQ8WTT2 800 aaKnown RBP27.08■■□□□ 1.93
RFX1-205ENST00000589239 DHX38Q92620 1227 aaKnown RBP27.08■■□□□ 1.93
RFX1-205ENST00000589239 GCOM2Q9BZD3 368 aaPredicted RBP27.08■■□□□ 1.93
RFX1-205ENST00000589239 PCIF1Q9H4Z3 704 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 B4GALT5O43286 388 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 CTSHP09668 335 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 THPOP40225 353 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 CYP2J2P51589 502 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 ATN1P54259 1190 aaPredicted RBP27.08■■□□□ 1.93
RFX1-205ENST00000589239 PTK7Q13308 1070 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 TMEM40Q8WWA1 233 aa27.08■■□□□ 1.93
RFX1-205ENST00000589239 MRPL4Q9BYD3 311 aaKnown RBP27.08■■□□□ 1.93
RFX1-205ENST00000589239 ACKR2O00590 384 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 CETN3O15182 167 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 FGFR4P22455 802 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 RPL13P26373 211 aaKnown RBP27.07■■□□□ 1.92
RFX1-205ENST00000589239 MRPS6P82932 125 aaKnown RBP27.07■■□□□ 1.92
RFX1-205ENST00000589239 NFIL3Q16649 462 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 ARMCX5Q6P1M9 558 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 SRGAP1Q7Z6B7 1085 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 TMEM106CQ9BVX2 250 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 PRMT7Q9NVM4 692 aaPredicted RBP27.07■■□□□ 1.92
RFX1-205ENST00000589239 KCNJ18B7U540 433 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 PIGRP01833 764 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 KCNJ12Q14500 433 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 AMHR2Q16671 573 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 RPAINQ86UA6 219 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 ZBTB45Q96K62 511 aaPredicted RBP27.07■■□□□ 1.92
RFX1-205ENST00000589239 CEP63Q96MT8 703 aa27.07■■□□□ 1.92
RFX1-205ENST00000589239 CGNQ9P2M7 1197 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms