RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 GPR149Q86SP6 731 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 HAS1Q92839 578 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 JPH2Q9BR39 696 aaPredicted RBP20.63■□□□□ 0.89
CCDC43-204ENST00000588687 LARP6Q9BRS8 491 aaKnown RBP20.63■□□□□ 0.89
CCDC43-204ENST00000588687 GBP3Q9H0R5 595 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 SFXN1Q9H9B4 322 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 MARCH5Q9NX47 278 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 FAM186AA6NE01 2351 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 INPPL1O15357 1258 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 EPB41L2O43491 1005 aaKnown RBP20.62■□□□□ 0.89
CCDC43-204ENST00000588687 CNPP09543 421 aaKnown RBP20.62■□□□□ 0.89
CCDC43-204ENST00000588687 RNASELQ05823 741 aaKnown RBP20.62■□□□□ 0.89
CCDC43-204ENST00000588687 ATAT1Q5SQI0 421 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 CWF19L1Q69YN2 538 aaKnown RBP20.62■□□□□ 0.89
CCDC43-204ENST00000588687 PPP4R3AQ6IN85 833 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 CABP7Q86V35 215 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 RNF168Q8IYW5 571 aaPredicted RBP20.62■□□□□ 0.89
CCDC43-204ENST00000588687 PRPF31Q8WWY3 499 aaKnown RBP20.62■□□□□ 0.89
CCDC43-204ENST00000588687 ATOH1Q92858 354 aaPredicted RBP20.62■□□□□ 0.89
CCDC43-204ENST00000588687 KLHL5Q96PQ7 755 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 PHF20Q9BVI0 1012 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 IRF2BPLQ9H1B7 796 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 RSAD1Q9HA92 442 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 LIMD1Q9UGP4 676 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 DBR1Q9UK59 544 aaKnown RBP20.62■□□□□ 0.89
CCDC43-204ENST00000588687 KCNJ14Q9UNX9 436 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 PPME1Q9Y570 386 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 DMXL1Q9Y485 3027 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 ZNF292O60281 2723 aa20.62■□□□□ 0.89
CCDC43-204ENST00000588687 CNTNAP2Q9UHC6 1331 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 LAMTOR4Q0VGL1 99 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 LETM2Q2VYF4 491 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 SRGAP1Q7Z6B7 1085 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 PPFIBP1Q86W92 1011 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 PLCD3Q8N3E9 789 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 SMG8Q8ND04 991 aaKnown RBP20.61■□□□□ 0.89
CCDC43-204ENST00000588687 SLC7A3Q8WY07 619 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 TMEM143Q96AN5 459 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 PGBD4Q96DM1 585 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 FAM20AQ96MK3 541 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 LXNQ9BS40 222 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 TMEM175Q9BSA9 504 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 TM6SF1Q9BZW5 370 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 DOCK8Q8NF50 2099 aa20.61■□□□□ 0.89
CCDC43-204ENST00000588687 CPLX1O14810 134 aa20.6■□□□□ 0.89
CCDC43-204ENST00000588687 NCLP19338 710 aaKnown RBP20.6■□□□□ 0.89
CCDC43-204ENST00000588687 RFC5P40937 340 aa20.6■□□□□ 0.89
CCDC43-204ENST00000588687 ASTLQ6HA08 431 aaPredicted RBP20.6■□□□□ 0.89
CCDC43-204ENST00000588687 NEK8Q86SG6 692 aa20.6■□□□□ 0.89
CCDC43-204ENST00000588687 C4orf19Q8IY42 314 aa20.6■□□□□ 0.89
CCDC43-204ENST00000588687 URGCPQ8TCY9 931 aa20.6■□□□□ 0.89
CCDC43-204ENST00000588687 PSPC1Q8WXF1 523 aaKnown RBP20.6■□□□□ 0.89
CCDC43-204ENST00000588687 CEP170P1Q96L14 293 aa20.6■□□□□ 0.89
CCDC43-204ENST00000588687 BMP2KQ9NSY1 1161 aaPredicted RBP20.6■□□□□ 0.89
CCDC43-204ENST00000588687 GJB4Q9NTQ9 266 aa20.6■□□□□ 0.89
CCDC43-204ENST00000588687 STK39Q9UEW8 545 aa20.6■□□□□ 0.89
CCDC43-204ENST00000588687 TDRD15B5MCY1 1934 aaKnown RBP20.6■□□□□ 0.89
CCDC43-204ENST00000588687 STK36Q9NRP7 1315 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 PTPRZ1P23471 2315 aaPredicted RBP20.59■□□□□ 0.89
CCDC43-204ENST00000588687 NRP1O14786 923 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 N4BP1O75113 896 aaKnown RBP20.59■□□□□ 0.89
CCDC43-204ENST00000588687 P4HBP07237 508 aaKnown RBP20.59■□□□□ 0.89
CCDC43-204ENST00000588687 GCFC2P16383 781 aaKnown RBP20.59■□□□□ 0.89
CCDC43-204ENST00000588687 NBL1P41271 181 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 DSC1Q08554 894 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 STK3Q13188 491 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 EMC2Q15006 297 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 EARS2Q5JPH6 523 aaKnown RBP20.59■□□□□ 0.89
CCDC43-204ENST00000588687 C15orf39Q6ZRI6 1047 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 CCDC149Q6ZUS6 474 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 ASCL5Q7RTU5 278 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 OXER1Q8TDS5 423 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 SNX27Q96L92 541 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 XPNPEP1Q9NQW7 623 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 CYP46A1Q9Y6A2 500 aa20.59■□□□□ 0.89
CCDC43-204ENST00000588687 DNAH14Q0VDD8 3507 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 TBX3O15119 743 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 PAPLNO95428 1278 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 SOD2P04179 222 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 SSBP05455 408 aaKnown RBP eCLIP20.58■□□□□ 0.89
CCDC43-204ENST00000588687 SRGAP2CP0DJJ0 459 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 NPR3P17342 541 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 YWHABP31946 246 aaKnown RBP20.58■□□□□ 0.89
CCDC43-204ENST00000588687 SCRN1Q12765 414 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 FERMT3Q86UX7 667 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 COLGALT2Q8IYK4 626 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 HERC2P3Q9BVR0 1158 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 EMILIN2Q9BXX0 1053 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 RGL1Q9NZL6 768 aa20.58■□□□□ 0.89
CCDC43-204ENST00000588687 PRR23AA6NEV1 266 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 F8W810 466 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 ZBTB39O15060 712 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 GAS2O43903 313 aaKnown RBP20.57■□□□□ 0.88
CCDC43-204ENST00000588687 TSPAN1O60635 241 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 DKC1O60832 514 aaKnown RBP eCLIP20.57■□□□□ 0.88
CCDC43-204ENST00000588687 POMCP01189 267 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 CLCN5P51795 746 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 EPHA7Q15375 998 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 AMHR2Q16671 573 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms