RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 NUP88Q99567 741 aaPredicted RBP6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 UQCC2Q9BRT2 126 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 UNKQ9C0B0 810 aaKnown RBP6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 RBM38Q9H0Z9 239 aaKnown RBP6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 EHD1Q9H4M9 534 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 C12orf10Q9HB07 376 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 IFT122Q9HBG6 1241 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 CNGB3Q9NQW8 809 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 GIN1Q9NXP7 522 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 EHD2Q9NZN4 543 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 STX18Q9P2W9 335 aaKnown RBP6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 WNK3Q9BYP7 1800 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 BHMG1C9JSJ3 638 aaPredicted RBP6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 TRAFD1O14545 582 aaPredicted RBP6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 CPLX1O14810 134 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 CAPN9O14815 690 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 SNX2O60749 519 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 TBX10O75333 385 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 CTDNEP1O95476 244 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 CDC25AP30304 524 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 RCVRNP35243 200 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 CHKAP35790 457 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 CDONQ4KMG0 1287 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 NT5DC1Q5TFE4 455 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 SPATA1Q5VX52 437 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 NXNQ6DKJ4 435 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 NFRKBQ6P4R8 1299 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 DHRS4L2Q6PKH6 230 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 C4orf50Q6ZRC1 276 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 REM2Q8IYK8 340 aaPredicted RBP6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 SPARTQ8N0X7 666 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 TOR1AIP2Q8NFQ8 470 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 OSCP1Q8WVF1 389 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 SLC7A6OSQ96CW6 309 aaPredicted RBP6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 NUP85Q9BW27 656 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 NDFIP2Q9NV92 336 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 RNF14Q9UBS8 474 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 NRXN3Q9Y4C0 1643 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 SPATA31D1Q6ZQQ2 1576 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 CARMIL3Q8ND23 1372 aa6.92□□□□□ -1.3
AP000547.3-204ENST00000588548 PRR36Q9H6K5 1346 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 SALL1Q9NSC2 1324 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 PTPDC1A2A3K4 754 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 WASLO00401 505 aaPredicted RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 ZNF862O60290 1169 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 OPHN1O60890 802 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 FUCA1P04066 466 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 NAGAP17050 411 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 TCEA1P23193 301 aaKnown RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 EPHB2P29323 1055 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 UBA7P41226 1012 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 EIF3BP55884 814 aaKnown RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 MGAT5Q09328 741 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 COX10Q12887 443 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 CUL1Q13616 776 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 ACVR2BQ13705 512 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 RASGRF1Q13972 1273 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 SEPT6Q14141 434 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 HSP90AA5PQ58FG0 334 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 TMTC3Q6ZXV5 915 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 TMEM151BQ8IW70 566 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 CPSF7Q8N684 471 aaKnown RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 TNIP2Q8NFZ5 429 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 EXD1Q8NHP7 514 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 PRPF31Q8WWY3 499 aaKnown RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 SELENOSQ9BQE4 189 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 THAP1Q9NVV9 213 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 FBXL5Q9UKA1 691 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 UTP11Q9Y3A2 253 aaKnown RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 IDH3BO43837 385 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 DKC1O60832 514 aaKnown RBP eCLIP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 TRMUO75648 421 aaKnown RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 KRT36O76013 467 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 MTA2O94776 668 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 EYA4O95677 639 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 CRYZL1O95825 349 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 CHEK2O96017 543 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 MARK3P27448 753 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 PPARGP37231 505 aaPredicted RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 COG7P83436 770 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 KCNC4Q03721 635 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 NIPAL4Q0D2K0 466 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 HNRNPDQ14103 355 aaKnown RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 ANO1Q5XXA6 986 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 ZNF746Q6NUN9 644 aaPredicted RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 DCDC5Q6ZRR9 648 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 SLC51BQ86UW2 128 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 LZTR1Q8N653 840 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 NATD1Q8N6N6 113 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 NPLOC4Q8TAT6 608 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 ANKRD49Q8WVL7 239 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 UBLCP1Q8WVY7 318 aaPredicted RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 SGCDQ92629 289 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 NUDT16Q96DE0 195 aaKnown RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 DNAJC7Q99615 494 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 ECSITQ9BQ95 431 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 GPATCH1Q9BRR8 931 aaKnown RBP6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 LRRC4CQ9HCJ2 640 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 FGFR1OP2Q9NVK5 253 aa6.91□□□□□ -1.3
AP000547.3-204ENST00000588548 HACD3Q9P035 362 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms