RNA–Protein interactions for RNA: ENST00000587743.1

SNHG16-205, Transcript of small nucleolar RNA host gene 16, humanhuman

Gene SNHG16, Length 2,665 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-205ENST00000587743 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.11■□□□□ 0.33
SNHG16-205ENST00000587743 DIS3Q9Y2L1 958 aaKnown RBP17.11■□□□□ 0.33
SNHG16-205ENST00000587743 SRCAPQ6ZRS2 3230 aa17.11■□□□□ 0.33
SNHG16-205ENST00000587743 FOSP01100 380 aaPredicted RBP17.1■□□□□ 0.33
SNHG16-205ENST00000587743 COMTP21964 271 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 CCDC25Q86WR0 208 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 SYCP3Q8IZU3 236 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 ZSWIM2Q8NEG5 633 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 INTS9Q9NV88 658 aaKnown RBP17.1■□□□□ 0.33
SNHG16-205ENST00000587743 DMAC2Q9NW81 257 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 CCT8L1PA6NM43 557 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 CCDC169A6NNP5 214 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 PYGMP11217 842 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 HOXA10P31260 410 aaPredicted RBP17.1■□□□□ 0.33
SNHG16-205ENST00000587743 RPUSD2Q8IZ73 545 aaKnown RBP17.1■□□□□ 0.33
SNHG16-205ENST00000587743 MKNK1Q9BUB5 465 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 DBNDD1Q9H9R9 158 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 FAM198AQ9UFP1 575 aa17.1■□□□□ 0.33
SNHG16-205ENST00000587743 EMSYQ7Z589 1322 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 FOXO6A8MYZ6 492 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 VIMP08670 466 aaKnown RBP17.09■□□□□ 0.33
SNHG16-205ENST00000587743 XRCC4Q13426 336 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 KIF22Q14807 665 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 LRRC14Q15048 493 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 SLC15A2Q16348 729 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 PREPLQ4J6C6 727 aaPredicted RBP17.09■□□□□ 0.33
SNHG16-205ENST00000587743 TBC1D10BQ4KMP7 808 aaPredicted RBP17.09■□□□□ 0.33
SNHG16-205ENST00000587743 FAM133BQ5BKY9 247 aaKnown RBP17.09■□□□□ 0.33
SNHG16-205ENST00000587743 HIBCHQ6NVY1 386 aaPredicted RBP17.09■□□□□ 0.33
SNHG16-205ENST00000587743 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
SNHG16-205ENST00000587743 CENPTQ96BT3 561 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 ZSWIM1Q9BR11 485 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 KDM4CQ9H3R0 1056 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNHG16-205ENST00000587743 RASAL2Q9UJF2 1139 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 PCDHA3Q9Y5H8 950 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 PPIP5K2O43314 1243 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 GCLMP48507 274 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 PPP3CAQ08209 521 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 PPP1R7Q15435 360 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 VPS72Q15906 364 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 SPDYCQ5MJ68 293 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 OTUD6AQ7L8S5 288 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 PCDHB18PQ96TA0 734 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 SUGT1Q9Y2Z0 365 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 CD2APQ9Y5K6 639 aa17.09■□□□□ 0.33
SNHG16-205ENST00000587743 SYNGAP1Q96PV0 1343 aa17.08■□□□□ 0.33
SNHG16-205ENST00000587743 G3V3G9 751 aa17.08■□□□□ 0.33
SNHG16-205ENST00000587743 PSMD10O75832 226 aa17.08■□□□□ 0.33
SNHG16-205ENST00000587743 DCAF8Q5TAQ9 597 aa17.08■□□□□ 0.33
SNHG16-205ENST00000587743 HHIPL2Q6UWX4 724 aa17.08■□□□□ 0.33
SNHG16-205ENST00000587743 RHOT2Q8IXI1 618 aa17.08■□□□□ 0.33
SNHG16-205ENST00000587743 DHX37Q8IY37 1157 aaKnown RBP17.08■□□□□ 0.33
SNHG16-205ENST00000587743 CCDC105Q8IYK2 499 aa17.08■□□□□ 0.33
SNHG16-205ENST00000587743 MGARPQ8TDB4 240 aa17.08■□□□□ 0.33
SNHG16-205ENST00000587743 ELMO3Q96BJ8 720 aa17.08■□□□□ 0.33
SNHG16-205ENST00000587743 SIPA1L1O43166 1804 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 A0A1W2PRG0 241 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.32
SNHG16-205ENST00000587743 BMP3P12645 472 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 CHRNA3P32297 505 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 MMP14P50281 582 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 PPP2R5EQ16537 467 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 MSL1Q68DK7 614 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 SP8Q8IXZ3 490 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 UBL4BQ8N7F7 174 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 CRAMP1Q96RY5 1269 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 SH2D3AQ9BRG2 576 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 DDX23Q9BUQ8 820 aaKnown RBP17.08■□□□□ 0.32
SNHG16-205ENST00000587743 MLXIPLQ9NP71 852 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 PI4KBQ9UBF8 816 aa17.08■□□□□ 0.32
SNHG16-205ENST00000587743 RIPK2O43353 540 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 GAS7O60861 476 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 SGPL1O95470 568 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 GH2P01242 217 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 CREB1P16220 341 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 CTNNA2P26232 953 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 PEX5P50542 639 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 DRG2P55039 364 aaKnown RBP17.07■□□□□ 0.32
SNHG16-205ENST00000587743 ELF3P78545 371 aaPredicted RBP17.07■□□□□ 0.32
SNHG16-205ENST00000587743 PPP2R5AQ15172 486 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 NFIL3Q16649 462 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 LONRF1Q17RB8 773 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 TRMT1LQ7Z2T5 733 aaKnown RBP17.07■□□□□ 0.32
SNHG16-205ENST00000587743 PIGWQ7Z7B1 504 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 ANKS4BQ8N8V4 417 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 TBC1D31Q96DN5 1066 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 ABCF3Q9NUQ8 709 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 PKD2L1Q9P0L9 805 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 MCM8Q9UJA3 840 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 HIP1RO75146 1068 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 CYP3A4P08684 503 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 GPC5P78333 572 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
SNHG16-205ENST00000587743 ABCB5Q2M3G0 1257 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 NSMFQ6X4W1 530 aa17.07■□□□□ 0.32
SNHG16-205ENST00000587743 DAW1Q8N136 415 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms