RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 TCP11Q8WWU5 503 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 PRPF31Q8WWY3 499 aaKnown RBP8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 PSPC1Q8WXF1 523 aaKnown RBP8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 ATOH1Q92858 354 aaPredicted RBP8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 CEP170P1Q96L14 293 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 NAP1L4Q99733 375 aaKnown RBP8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 TMEM175Q9BSA9 504 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 PHF20Q9BVI0 1012 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 VN1R3Q9BXE9 311 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 EMILIN2Q9BXX0 1053 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 SFXN1Q9H9B4 322 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 UBN1Q9NPG3 1134 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 PPP4R2Q9NY27 417 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 DNAJB4Q9UDY4 337 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 LIMD1Q9UGP4 676 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 DBR1Q9UK59 544 aaKnown RBP8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 VAV3Q9UKW4 847 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 INPP5FQ9Y2H2 1132 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 FAN1Q9Y2M0 1017 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 MYO15AQ9UKN7 3530 aa8.98□□□□□ -0.97
CAPNS1-203ENST00000586963 CCDC194A0A1B0GVG4 234 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 NRP1O14786 923 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 B4GALT3O60512 393 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 GFRA3O60609 400 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 CDKL5O76039 1030 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 DDHD2O94830 711 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 CNPP09543 421 aaKnown RBP8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 WEE2P0C1S8 567 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 SRGAP2CP0DJJ0 459 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 XBP1P17861 261 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 NCLP19338 710 aaKnown RBP8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 KLRC2P26717 231 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 CLCN4P51793 760 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 CLCN5P51795 746 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 LAMTOR4Q0VGL1 99 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 UBXN11Q5T124 520 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 ERICH6BQ5W0A0 696 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 ASTLQ6HA08 431 aaPredicted RBP8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 KANK3Q6NY19 840 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 TMC5Q6UXY8 1006 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 CYP26C1Q6V0L0 522 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 C15orf39Q6ZRI6 1047 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 OTOP3Q7RTS5 596 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 NEK8Q86SG6 692 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 ZNF579Q8NAF0 562 aaKnown RBP8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 ACSF2Q96CM8 615 aaPredicted RBP8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 AIFM3Q96NN9 605 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 KLHL5Q96PQ7 755 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 FAM193BQ96PV7 902 aaPredicted RBP8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 GBP3Q9H0R5 595 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 SLKQ9H2G2 1235 aaPredicted RBP8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 MINDY3Q9H8M7 445 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 RSAD1Q9HA92 442 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 MRPL17Q9NRX2 175 aaKnown RBP8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 FAM86C1Q9NVL1 165 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 WRAP73Q9P2S5 460 aaPredicted RBP8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 KCNJ14Q9UNX9 436 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 SSX2IPQ9Y2D8 614 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 VPS13AQ96RL7 3174 aa8.97□□□□□ -0.97
CAPNS1-203ENST00000586963 H0Y858 1186 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 INPPL1O15357 1258 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 CCNT1O60563 726 aaKnown RBP8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 C1RP00736 705 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 SOD2P04179 222 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 ASGR2P07307 311 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 AXLP30530 894 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 YWHABP31946 246 aaKnown RBP8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 AFF1P51825 1210 aaKnown RBP8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 POU5F1BQ06416 359 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 NCBP1Q09161 790 aaKnown RBP8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 STK3Q13188 491 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 MXD4Q14582 209 aaPredicted RBP8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 CCDC149Q6ZUS6 474 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 FERMT3Q86UX7 667 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 IFNLR1Q8IU57 520 aaPredicted RBP8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 TMEM105Q8N8V8 129 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 RNF149Q8NC42 400 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 CMASQ8NFW8 434 aaPredicted RBP8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 HAS1Q92839 578 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 TMEM143Q96AN5 459 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 CCDC51Q96ER9 411 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 LARP6Q9BRS8 491 aaKnown RBP8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 LXNQ9BS40 222 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 RHOBTB2Q9BYZ6 727 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 ZSWIM4Q9H7M6 989 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 PDRG1Q9NUG6 133 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 DPP7Q9UHL4 492 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 STK36Q9NRP7 1315 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 DMDP11532 3685 aa8.96□□□□□ -0.98
CAPNS1-203ENST00000586963 WDR81Q562E7 1941 aa8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 MARCH6O60337 910 aa8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 ERLIN2O94905 339 aa8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 SLITRK3O94933 977 aa8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 BAG4O95429 457 aaKnown RBP8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 EFEMP2O95967 443 aa8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 POMCP01189 267 aa8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 ITGA4P13612 1032 aa8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 NBL1P41271 181 aa8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 PTENP60484 403 aa8.95□□□□□ -0.98
CAPNS1-203ENST00000586963 SPIRE1Q08AE8 756 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms