RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	MRPL10	Q7Z7H8	261 aa	Known RBP	24.52	■■□□□ 1.52
PLEKHM1-214	ENST00000586084	GPR149	Q86SP6	731 aa		24.52	■■□□□ 1.52
PLEKHM1-214	ENST00000586084	ZNF280B	Q86YH2	543 aa		24.52	■■□□□ 1.52
PLEKHM1-214	ENST00000586084	TMEM105	Q8N8V8	129 aa		24.52	■■□□□ 1.52
PLEKHM1-214	ENST00000586084	CEP170P1	Q96L14	293 aa		24.52	■■□□□ 1.52
PLEKHM1-214	ENST00000586084	TMEM175	Q9BSA9	504 aa		24.52	■■□□□ 1.52
PLEKHM1-214	ENST00000586084	SMOC2	Q9H3U7	446 aa		24.52	■■□□□ 1.52
PLEKHM1-214	ENST00000586084	CYP46A1	Q9Y6A2	500 aa		24.52	■■□□□ 1.52
PLEKHM1-214	ENST00000586084	PROB1	E7EW31	1015 aa		24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	SLC37A4	O43826	429 aa		24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	P4HB	P07237	508 aa	Known RBP	24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	RFC5	P40937	340 aa		24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	NPEPPS	P55786	919 aa		24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	NPY5R	Q15761	445 aa		24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	OTOP3	Q7RTS5	596 aa		24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	PRPF31	Q8WWY3	499 aa	Known RBP	24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	KLHL5	Q96PQ7	755 aa		24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	VN1R3	Q9BXE9	311 aa		24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	DHX33	Q9H6R0	707 aa	Known RBP	24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	MRPL17	Q9NRX2	175 aa	Known RBP	24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	FAN1	Q9Y2M0	1017 aa		24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	TDRD15	B5MCY1	1934 aa	Known RBP	24.51	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	CCDC194	A0A1B0GVG4	234 aa		24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	EML1	O00423	815 aa		24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	EPB41L2	O43491	1005 aa	Known RBP	24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	GAS2	O43903	313 aa	Known RBP	24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	SRGAP2C	P0DJJ0	459 aa		24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	GCFC2	P16383	781 aa	Known RBP	24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	CLCN4	P51793	760 aa		24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	CNNM3	Q8NE01	707 aa		24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	TCP11	Q8WWU5	503 aa		24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	VAV3	Q9UKW4	847 aa		24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	SSX2IP	Q9Y2D8	614 aa		24.5	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	ASAP2	O43150	1006 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	B4GALT3	O60512	393 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	DDHD2	O94830	711 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	SSB	P05455	408 aa	Known RBP eCLIP	24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	CNP	P09543	421 aa	Known RBP	24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	CLCN5	P51795	746 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	ELMSAN1	Q6PJG2	1045 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	C15orf39	Q6ZRI6	1047 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	OTUD6A	Q7L8S5	288 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	NEK8	Q86SG6	692 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	TMEM143	Q96AN5	459 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	AIFM3	Q96NN9	605 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	KCNMB3	Q9NPA1	279 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	UBN1	Q9NPG3	1134 aa		24.49	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	ERLIN2	O94905	339 aa		24.48	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	LAMTOR4	Q0VGL1	99 aa		24.48	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	PPP4R3A	Q6IN85	833 aa		24.48	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	C4orf19	Q8IY42	314 aa		24.48	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	NAP1L4	Q99733	375 aa	Known RBP	24.48	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	DPP7	Q9UHL4	492 aa		24.48	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	NRP1	O14786	923 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	TBX3	O15119	743 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	MARCH6	O60337	910 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	CDKL5	O76039	1030 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	POMC	P01189	267 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	UROD	P06132	367 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	XBP1	P17861	261 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	NCL	P19338	710 aa	Known RBP	24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	HOXA11	P31270	313 aa	Predicted RBP	24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	YWHAB	P31946	246 aa	Known RBP	24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	STK3	Q13188	491 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	TDG	Q13569	410 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	PCBP1	Q15365	356 aa	Known RBP eCLIP	24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	ZNF579	Q8NAF0	562 aa	Known RBP	24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	LXN	Q9BS40	222 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	TM6SF1	Q9BZW5	370 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	MINDY3	Q9H8M7	445 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	KCNJ14	Q9UNX9	436 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	USP34	Q70CQ2	3546 aa		24.47	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	LILRB3	O75022	631 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	SOD2	P04179	222 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	ITGA4	P13612	1032 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	NBL1	P41271	181 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	EMC2	Q15006	297 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	EPHA7	Q15375	998 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	UBXN11	Q5T124	520 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	FERMT3	Q86UX7	667 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	RNF149	Q8NC42	400 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	SNX27	Q96L92	541 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	PHF20	Q9BVI0	1012 aa		24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	WRAP73	Q9P2S5	460 aa	Predicted RBP	24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	24.46	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	MTCL1	Q9Y4B5	1905 aa	Known RBP	24.45	■■□□□ 1.51
PLEKHM1-214	ENST00000586084	CCNT1	O60563	726 aa	Known RBP	24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	ADH1A	P07327	375 aa		24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	AXL	P30530	894 aa		24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	AFF1	P51825	1210 aa	Known RBP	24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	NCBP1	Q09161	790 aa	Known RBP	24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	FLCN	Q8NFG4	579 aa		24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	LARP6	Q9BRS8	491 aa	Known RBP	24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	ZSWIM4	Q9H7M6	989 aa		24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	BMP2K	Q9NSY1	1161 aa	Predicted RBP	24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	IGSF9	Q9P2J2	1179 aa		24.45	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	AK2	P54819	239 aa		24.44	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	XKR9	Q5GH70	373 aa		24.44	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	CYP26C1	Q6V0L0	522 aa		24.44	■■□□□ 1.5
PLEKHM1-214	ENST00000586084	CMAS	Q8NFW8	434 aa	Predicted RBP	24.44	■■□□□ 1.5

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms