RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 HAS1Q92839 578 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 DYDC2Q96IM9 177 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 FAM193BQ96PV7 902 aaPredicted RBP22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 TM6SF1Q9BZW5 370 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 KCNMB3Q9NPA1 279 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 AGPAT5Q9NUQ2 364 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 SORCS3Q9UPU3 1222 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 FAN1Q9Y2M0 1017 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 ZDBF2Q9HCK1 2354 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 C2CD2LO14523 706 aa22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 XKR9Q5GH70 373 aa22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 EARS2Q5JPH6 523 aaKnown RBP22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 UBXN11Q5T124 520 aa22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 TAS1R1Q7RTX1 841 aa22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 MRPL10Q7Z7H8 261 aaKnown RBP22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 TPH2Q8IWU9 490 aa22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 PSPC1Q8WXF1 523 aaKnown RBP22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 KLHL5Q96PQ7 755 aa22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 DHX33Q9H6R0 707 aaKnown RBP22.48■■□□□ 1.19
CLPTM1-204ENST00000585961 NRP1O14786 923 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 YWHABP31946 246 aaKnown RBP22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 RAB27AP51159 221 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 CYP4A11Q02928 519 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 MTMR3Q13615 1198 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 GIT2Q14161 759 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 EPHA7Q15375 998 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 PTPN14Q15678 1187 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 PPP4R3AQ6IN85 833 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 SRGAP1Q7Z6B7 1085 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 TDRD5Q8NAT2 981 aaKnown RBP22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 RNF149Q8NC42 400 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 RSAD1Q9HA92 442 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 DZANK1Q9NVP4 752 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 IRAK3Q9Y616 596 aa22.47■■□□□ 1.19
CLPTM1-204ENST00000585961 A0A087WWV3 80 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 FAM205CA6NFA0 338 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 DKC1O60832 514 aaKnown RBP eCLIP22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 CNPP09543 421 aaKnown RBP22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 KIAA1841Q6NSI8 718 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 OTUD6AQ7L8S5 288 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 POTEDQ86YR6 584 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 UBALD2Q8IYN6 164 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 CPB2Q96IY4 423 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 LXNQ9BS40 222 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 EMILIN2Q9BXX0 1053 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 RNF39Q9H2S5 420 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 TPCN1Q9ULQ1 816 aa22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 PRG3Q9Y2Y8 225 aaPredicted RBP22.46■■□□□ 1.19
CLPTM1-204ENST00000585961 RFC5P40937 340 aa22.45■■□□□ 1.18
CLPTM1-204ENST00000585961 FERMT3Q86UX7 667 aa22.45■■□□□ 1.18
CLPTM1-204ENST00000585961 C4orf19Q8IY42 314 aa22.45■■□□□ 1.18
CLPTM1-204ENST00000585961 ZDHHC14Q8IZN3 488 aa22.45■■□□□ 1.18
CLPTM1-204ENST00000585961 EIF2AQ9BY44 585 aaKnown RBP22.45■■□□□ 1.18
CLPTM1-204ENST00000585961 MIOSQ9NXC5 875 aa22.45■■□□□ 1.18
CLPTM1-204ENST00000585961 KANSL3Q9P2N6 904 aa22.45■■□□□ 1.18
CLPTM1-204ENST00000585961 HES2Q9Y543 173 aa22.45■■□□□ 1.18
CLPTM1-204ENST00000585961 BAG4O95429 457 aaKnown RBP22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 ITGA4P13612 1032 aa22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 XBP1P17861 261 aa22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 OR1G1P47890 313 aa22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 AK2P54819 239 aa22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 EMC2Q15006 297 aa22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 PPFIBP1Q86W92 1011 aa22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 EXOC8Q8IYI6 725 aa22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 PLCD3Q8N3E9 789 aa22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 SMG8Q8ND04 991 aaKnown RBP22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 APOL6Q9BWW8 343 aa22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 MRPL17Q9NRX2 175 aaKnown RBP22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 ORC3Q9UBD5 711 aaPredicted RBP22.44■■□□□ 1.18
CLPTM1-204ENST00000585961 ASAP2O43150 1006 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 LILRB3O75022 631 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 CDKL5O76039 1030 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 SLITRK3O94933 977 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 CTDNEP1O95476 244 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 GCFC2P16383 781 aaKnown RBP22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 CLCN4P51793 760 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 NR5A1Q13285 461 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 GPR149Q86SP6 731 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 FAM177A1Q8N128 213 aaPredicted RBP22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 TMEM105Q8N8V8 129 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 NECAB1Q8N987 351 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 TCP11Q8WWU5 503 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 RSPH1Q8WYR4 309 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 GAD1Q99259 594 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 ZSWIM4Q9H7M6 989 aa22.43■■□□□ 1.18
CLPTM1-204ENST00000585961 USP34Q70CQ2 3546 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 CARNS1A5YM72 827 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 PFKFB2O60825 505 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 ERLIN2O94905 339 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 SPATA31D3P0C874 917 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 NCLP19338 710 aaKnown RBP22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 FOSBP53539 338 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 SPATA31D4Q6ZUB0 917 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 MTRQ99707 1265 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 EIF2AK1Q9BQI3 630 aaKnown RBP22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 TMEM175Q9BSA9 504 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 MFSD1Q9H3U5 465 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 IPPQ9Y573 584 aa22.42■■□□□ 1.18
CLPTM1-204ENST00000585961 F8W810 466 aa22.41■■□□□ 1.18
CLPTM1-204ENST00000585961 INO80B-WBP1J3KQ70 363 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms