RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 NME8Q8N427 588 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 TMEM40Q8WWA1 233 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 PRPF31Q8WWY3 499 aaKnown RBP13.9□□□□□ -0.18
VMP1-202ENST00000585847 P2RX5Q93086 422 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 SCLYQ96I15 445 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 FIZ1Q96SL8 496 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 REEP2Q9BRK0 252 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 THAP9Q9H5L6 903 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 PRDM5Q9NQX1 630 aaPredicted RBP13.9□□□□□ -0.18
VMP1-202ENST00000585847 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
VMP1-202ENST00000585847 AKT3Q9Y243 479 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 NFE2L3Q9Y4A8 694 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 TRPV2Q9Y5S1 764 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 A0A087WZ62 844 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 SFI1A8K8P3 1242 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 NBNO60934 754 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 TPM2P07951 284 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 SELPP16109 830 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 TMOD1P28289 359 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 NLRP11P59045 1033 aaKnown RBP13.89□□□□□ -0.19
VMP1-202ENST00000585847 BFSP2Q13515 415 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 CAPSQ13938 189 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 MYBPC2Q14324 1141 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 PPP2R5AQ15172 486 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 NFIL3Q16649 462 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 KIZQ2M2Z5 673 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 EDRF1Q3B7T1 1238 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 FAM102BQ5T8I3 360 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 FAM109BQ6ICB4 259 aaPredicted RBP13.89□□□□□ -0.19
VMP1-202ENST00000585847 CENPPQ6IPU0 288 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 LRRC8DQ7L1W4 858 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 DYMQ7RTS9 669 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 RHPN2Q8IUC4 686 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 TMEM174Q8WUU8 243 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 SPIRE2Q8WWL2 714 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 TCP11Q8WWU5 503 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 NELFBQ8WX92 580 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 PSPC1Q8WXF1 523 aaKnown RBP13.89□□□□□ -0.19
VMP1-202ENST00000585847 FDXACB1Q9BRP7 624 aaPredicted RBP13.89□□□□□ -0.19
VMP1-202ENST00000585847 CELF4Q9BZC1 486 aaKnown RBP13.89□□□□□ -0.19
VMP1-202ENST00000585847 IFT122Q9HBG6 1241 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 PCDHB13Q9Y5F0 798 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 UNC80Q8N2C7 3258 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 ADGRA3Q8IWK6 1321 aa13.89□□□□□ -0.19
VMP1-202ENST00000585847 ZNF18P17022 549 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 PRCPP42785 496 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 SMTNP53814 917 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 FILIP1LQ4L180 1135 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 FBXO47Q5MNV8 452 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 CDKAL1Q5VV42 579 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 MFSD5Q6N075 450 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 IFNLR1Q8IU57 520 aaPredicted RBP13.88□□□□□ -0.19
VMP1-202ENST00000585847 BADQ92934 168 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 IQCDQ96DY2 449 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 CEP63Q96MT8 703 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 MAP7D2Q96T17 732 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 OSMRQ99650 979 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 TMEM206Q9H813 350 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 MINDY3Q9H8M7 445 aa13.88□□□□□ -0.19
VMP1-202ENST00000585847 AGO3Q9H9G7 860 aaKnown RBP13.88□□□□□ -0.19
VMP1-202ENST00000585847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
VMP1-202ENST00000585847 PDXKO00764 312 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 ASAP2O43150 1006 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
VMP1-202ENST00000585847 CXCL10P02778 98 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 EDN1P05305 212 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 RPLP2P05387 115 aaKnown RBP13.87□□□□□ -0.19
VMP1-202ENST00000585847 PLS3P13797 630 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 RAG1P15918 1043 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 RPL13P26373 211 aaKnown RBP13.87□□□□□ -0.19
VMP1-202ENST00000585847 CRYBB1P53674 252 aaPredicted RBP13.87□□□□□ -0.19
VMP1-202ENST00000585847 EPHB4P54760 987 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 PPP2R3AQ06190 1150 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 POU5F1BQ06416 359 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 STK4Q13043 487 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 LPIN1Q14693 890 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 TAS1R3Q7RTX0 852 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 ZNF410Q86VK4 478 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 FAM228AQ86W67 206 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 FAM178BQ8IXR5 827 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 ZNF710Q8N1W2 664 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 CCDC155Q8N6L0 562 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 RNF149Q8NC42 400 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 KIAA0895Q8NCT3 520 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 NLRP4Q96MN2 994 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 GUCD1Q96NT3 240 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 KIFC3Q9BVG8 833 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 COL25A1Q9BXS0 654 aaPredicted RBP13.87□□□□□ -0.19
VMP1-202ENST00000585847 TRIM5Q9C035 493 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 MAGEC2Q9UBF1 373 aaPredicted RBP13.87□□□□□ -0.19
VMP1-202ENST00000585847 EXOC7Q9UPT5 735 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 CTNND2Q9UQB3 1225 aa13.87□□□□□ -0.19
VMP1-202ENST00000585847 NOC2LQ9Y3T9 749 aaKnown RBP13.87□□□□□ -0.19
VMP1-202ENST00000585847 MICAL3Q7RTP6 2002 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 LRRC10BA6NIK2 292 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 CALUO43852 315 aaPredicted RBP13.86□□□□□ -0.19
VMP1-202ENST00000585847 SRGAP2CP0DJJ0 459 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 GHRP10912 638 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 DARSP14868 501 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms