RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 TNMDQ9H2S6 317 aa23.64■■□□□ 1.37
RETREG3-202ENST00000585726 GOLPH3LQ9H4A5 285 aa23.64■■□□□ 1.37
RETREG3-202ENST00000585726 SLC28A3Q9HAS3 691 aa23.64■■□□□ 1.37
RETREG3-202ENST00000585726 KCNG1Q9UIX4 513 aa23.64■■□□□ 1.37
RETREG3-202ENST00000585726 INSL6Q9Y581 213 aa23.64■■□□□ 1.37
RETREG3-202ENST00000585726 A0A0U1RQF3 1178 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 TTLL13PA6NNM8 815 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 SYKP43405 635 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 AFMP43652 599 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 FAM189BP81408 668 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 AMPD3Q01432 767 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 PPP4R3CPQ6ZMV5 832 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 SPIRE2Q8WWL2 714 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 DNAJC19Q96DA6 116 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 FAM161BQ96MY7 647 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 LRRC27Q9C0I9 530 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 FAM105AQ9NUU6 356 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 KBTBD4Q9NVX7 518 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 ARHGAP28Q9P2N2 729 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 HPSEQ9Y251 543 aa23.63■■□□□ 1.37
RETREG3-202ENST00000585726 K7ENM7 598 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 ACKR2O00590 384 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 TRAK2O60296 914 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 EDN1P05305 212 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 FGFR1P11362 822 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 ZNF131P52739 623 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 HTRA4P83105 476 aaPredicted RBP23.62■■□□□ 1.37
RETREG3-202ENST00000585726 FAM187BQ17R55 369 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 PAN2Q504Q3 1202 aaKnown RBP23.62■■□□□ 1.37
RETREG3-202ENST00000585726 UBXN11Q5T124 520 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 PPP2R2DQ66LE6 453 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 FAM178BQ8IXR5 827 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 GRAMD1CQ8IYS0 662 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 CRIPAKQ8N1N5 446 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 TMEM161BQ8NDZ6 487 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 PRIMPOLQ96LW4 560 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 NTPCRQ9BSD7 190 aaKnown RBP23.62■■□□□ 1.37
RETREG3-202ENST00000585726 EIF2AQ9BY44 585 aaKnown RBP23.62■■□□□ 1.37
RETREG3-202ENST00000585726 TMEM134Q9H6X4 195 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 RNF216Q9NWF9 866 aaPredicted RBP23.62■■□□□ 1.37
RETREG3-202ENST00000585726 TMEM161AQ9NX61 479 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 TBC1D7Q9P0N9 293 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 PCDHB2Q9Y5E7 798 aa23.62■■□□□ 1.37
RETREG3-202ENST00000585726 PHLPP2Q6ZVD8 1323 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 DGKIO75912 1065 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 ARHGEF15O94989 841 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 CASP1P29466 404 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 STRN3Q13033 797 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 CSPP1Q1MSJ5 1256 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 ZNF697Q5TEC3 545 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 Q7L0L9 218 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 HAUS6Q7Z4H7 955 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 SFR1Q86XK3 245 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 LPPQ93052 612 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 TRIM6Q9C030 488 aaPredicted RBP23.61■■□□□ 1.37
RETREG3-202ENST00000585726 BLZF1Q9H2G9 400 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 ELAC1Q9H777 363 aaKnown RBP23.61■■□□□ 1.37
RETREG3-202ENST00000585726 MAGEF1Q9HAY2 307 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 PANK4Q9NVE7 773 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 GBF1Q92538 1859 aa23.61■■□□□ 1.37
RETREG3-202ENST00000585726 CNTNAP2Q9UHC6 1331 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 ACTN4O43707 911 aaKnown RBP23.6■■□□□ 1.37
RETREG3-202ENST00000585726 NPTXRO95502 500 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 SLFN14P0C7P3 912 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 MAPTP10636 758 aaKnown RBP23.6■■□□□ 1.37
RETREG3-202ENST00000585726 SKIP12755 728 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 NMT1P30419 496 aaKnown RBP23.6■■□□□ 1.37
RETREG3-202ENST00000585726 RAB27AP51159 221 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 NCKAP1LP55160 1127 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 ASIC1P78348 528 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 BTG3Q14201 252 aaPredicted RBP23.6■■□□□ 1.37
RETREG3-202ENST00000585726 NT5DC1Q5TFE4 455 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 TAS1R3Q7RTX0 852 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 TRIM9Q9C026 710 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 ZNF576Q9H609 170 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 CERS4Q9HA82 394 aa23.6■■□□□ 1.37
RETREG3-202ENST00000585726 FAM237AA0A1B0GTK4 181 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 A0A1B0GUA9 196 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 TBKBP1A7MCY6 615 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 H0YCG3 227 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 ATF7P17544 494 aaPredicted RBP23.59■■□□□ 1.37
RETREG3-202ENST00000585726 HERC4Q5GLZ8 1057 aaPredicted RBP23.59■■□□□ 1.37
RETREG3-202ENST00000585726 ATF7IP2Q5U623 682 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 SLC27A1Q6PCB7 646 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 CCDC65Q8IXS2 484 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 ZNF689Q96CS4 500 aaPredicted RBP23.59■■□□□ 1.37
RETREG3-202ENST00000585726 CCDC51Q96ER9 411 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 PAGE5Q96GU1 130 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 TARS2Q9BW92 718 aaKnown RBP23.59■■□□□ 1.37
RETREG3-202ENST00000585726 TRAIPQ9BWF2 469 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 APOL6Q9BWW8 343 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 TTYH1Q9H313 450 aaPredicted RBP23.59■■□□□ 1.37
RETREG3-202ENST00000585726 PDZD7Q9H5P4 517 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 TTC3P53804 2025 aa23.59■■□□□ 1.37
RETREG3-202ENST00000585726 MEIS3P2A8K0S8 358 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 N4BP3O15049 544 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 EOMESO95936 686 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 GAP43P17677 238 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 TAP1Q03518 808 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 EEF1DP3Q658K8 133 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms