RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 MRPL9Q9BYD2 267 aaKnown RBP9.56□□□□□ -0.88
ATG4D-202ENST00000585437 NT5C3AQ9H0P0 336 aa9.56□□□□□ -0.88
ATG4D-202ENST00000585437 FZD8Q9H461 694 aa9.56□□□□□ -0.88
ATG4D-202ENST00000585437 TYW1Q9NV66 732 aaKnown RBP9.56□□□□□ -0.88
ATG4D-202ENST00000585437 PLAGL2Q9UPG8 496 aa9.56□□□□□ -0.88
ATG4D-202ENST00000585437 PCDHB2Q9Y5E7 798 aa9.56□□□□□ -0.88
ATG4D-202ENST00000585437 PLXNA3P51805 1871 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 VWA8A3KMH1 1905 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 GOLGA6L3A6NEY3 463 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 INO80B-WBP1J3KQ70 363 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 ERLIN2O94905 339 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 EDN1P05305 212 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 ZSCAN22P10073 491 aaPredicted RBP9.55□□□□□ -0.88
ATG4D-202ENST00000585437 ARF4P18085 180 aaPredicted RBP9.55□□□□□ -0.88
ATG4D-202ENST00000585437 LAG3P18627 525 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 NCLP19338 710 aaKnown RBP9.55□□□□□ -0.88
ATG4D-202ENST00000585437 DNAJB1P25685 340 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 LONP1P36776 959 aaKnown RBP9.55□□□□□ -0.88
ATG4D-202ENST00000585437 UBE3AQ05086 875 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 GRIN1Q05586 938 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 PKP1Q13835 747 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 FAM173BQ6P4H8 233 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 NOTUMQ6P988 496 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 AGMOQ6ZNB7 445 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 C1orf186Q6ZWK4 172 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 MICALL1Q8N3F8 863 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 KLHL23Q8NBE8 558 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 SMG8Q8ND04 991 aaKnown RBP9.55□□□□□ -0.88
ATG4D-202ENST00000585437 SPPL3Q8TCT6 385 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 HELQQ8TDG4 1101 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 ATXN2LQ8WWM7 1075 aaKnown RBP9.55□□□□□ -0.88
ATG4D-202ENST00000585437 PPM1EQ8WY54 764 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 KIFAP3Q92845 792 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 LPPQ93052 612 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 RUSC1Q9BVN2 902 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 CSRNP2Q9H175 543 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 C2orf40Q9H1Z8 148 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 ZSCAN16Q9H4T2 348 aaPredicted RBP9.55□□□□□ -0.88
ATG4D-202ENST00000585437 NSUN3Q9H649 340 aaKnown RBP9.55□□□□□ -0.88
ATG4D-202ENST00000585437 FBXO2Q9UK22 296 aaPredicted RBP9.55□□□□□ -0.88
ATG4D-202ENST00000585437 DNM3Q9UQ16 869 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 ZDHHC9Q9Y397 364 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 CLIC4Q9Y696 253 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 C5orf42Q9H799 3197 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 BDP1A6H8Y1 2624 aa9.55□□□□□ -0.88
ATG4D-202ENST00000585437 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.54□□□□□ -0.88
ATG4D-202ENST00000585437 A0A1B0GUA9 196 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 LRRIQ4A6NIV6 560 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 TTLL13PA6NNM8 815 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 B4GALT5O43286 388 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 B4GALT3O60512 393 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 OFD1O75665 1012 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 GUCY2CP25092 1073 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 NASPP49321 788 aaPredicted RBP9.54□□□□□ -0.88
ATG4D-202ENST00000585437 SLC12A3P55017 1021 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 PLCB3Q01970 1234 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 PPP2R5AQ15172 486 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 RINT1Q6NUQ1 792 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 SLC27A1Q6PCB7 646 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 MAEAQ7L5Y9 396 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 CABP7Q86V35 215 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 ABI1Q8IZP0 508 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 SYT2Q8N9I0 419 aaPredicted RBP9.54□□□□□ -0.88
ATG4D-202ENST00000585437 CNNM3Q8NE01 707 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 KCNN1Q92952 543 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 SYAP1Q96A49 352 aaPredicted RBP9.54□□□□□ -0.88
ATG4D-202ENST00000585437 USP28Q96RU2 1077 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 TIPINQ9BVW5 301 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 EIF2AQ9BY44 585 aaKnown RBP9.54□□□□□ -0.88
ATG4D-202ENST00000585437 CCSER1Q9C0I3 900 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 ALG13Q9NP73 1137 aaKnown RBP9.54□□□□□ -0.88
ATG4D-202ENST00000585437 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 BLOC1S4Q9NUP1 217 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 TBC1D13Q9NVG8 400 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 PRMT7Q9NVM4 692 aaPredicted RBP9.54□□□□□ -0.88
ATG4D-202ENST00000585437 KCND2Q9NZV8 630 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 ARHGAP28Q9P2N2 729 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 COG5Q9UP83 839 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 LZTS1Q9Y250 596 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 IPPQ9Y573 584 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 PCDHB12Q9Y5F1 795 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 MTCL1Q9Y4B5 1905 aaKnown RBP9.54□□□□□ -0.88
ATG4D-202ENST00000585437 PHLPP2Q6ZVD8 1323 aa9.54□□□□□ -0.88
ATG4D-202ENST00000585437 ACKR2O00590 384 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 FSCN2O14926 492 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 HIP1RO75146 1068 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 FGF18O76093 207 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 F13A1P00488 732 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 IBSPP21815 317 aaPredicted RBP9.53□□□□□ -0.88
ATG4D-202ENST00000585437 PPM1AP35813 382 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 EFNA5P52803 228 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 TCEAL5Q5H9L2 206 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 TJAP1Q5JTD0 557 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 KCNT2Q6UVM3 1135 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 GLB1LQ6UWU2 654 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 ZBTB8OSQ8IWT0 167 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 SLC39A11Q8N1S5 342 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 TMEM87AQ8NBN3 555 aa9.53□□□□□ -0.88
ATG4D-202ENST00000585437 RNF169Q8NCN4 708 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms