RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 MINDY3Q9H8M7 445 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 KCNMB3Q9NPA1 279 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 KANSL3Q9P2N6 904 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 WRAP73Q9P2S5 460 aaPredicted RBP16.21■□□□□ 0.19
SDF2-202ENST00000585428 DBR1Q9UK59 544 aaKnown RBP16.21■□□□□ 0.19
SDF2-202ENST00000585428 VAV3Q9UKW4 847 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 INPP5FQ9Y2H2 1132 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 PPME1Q9Y570 386 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 COL4A3BPQ9Y5P4 624 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 GFRA3O60609 400 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 P4HBP07237 508 aaKnown RBP16.2■□□□□ 0.18
SDF2-202ENST00000585428 CNPP09543 421 aaKnown RBP16.2■□□□□ 0.18
SDF2-202ENST00000585428 CLCN4P51793 760 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 CLCN5P51795 746 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 ASTLQ6HA08 431 aaPredicted RBP16.2■□□□□ 0.18
SDF2-202ENST00000585428 TMC5Q6UXY8 1006 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 KRT25Q7Z3Z0 450 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 TDRD5Q8NAT2 981 aaKnown RBP16.2■□□□□ 0.18
SDF2-202ENST00000585428 SLC7A3Q8WY07 619 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 HAS1Q92839 578 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 PHF20Q9BVI0 1012 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 TM6SF1Q9BZW5 370 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 FAN1Q9Y2M0 1017 aa16.2■□□□□ 0.18
SDF2-202ENST00000585428 NRP1O14786 923 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 CPLX1O14810 134 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 DKC1O60832 514 aaKnown RBP eCLIP16.19■□□□□ 0.18
SDF2-202ENST00000585428 EFEMP2O95967 443 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 SRGAP2CP0DJJ0 459 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 KLRC2P26717 231 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 LAMTOR4Q0VGL1 99 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 LETM2Q2VYF4 491 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 C4orf19Q8IY42 314 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 TMEM143Q96AN5 459 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 CEP170P1Q96L14 293 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 TMEM175Q9BSA9 504 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 EMILIN2Q9BXX0 1053 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 GBP3Q9H0R5 595 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 KCNJ14Q9UNX9 436 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 CFAP54Q96N23 3096 aa16.19■□□□□ 0.18
SDF2-202ENST00000585428 KMT2EQ8IZD2 1858 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 ZDBF2Q9HCK1 2354 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 TBX3O15119 743 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 ASAP2O43150 1006 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 NCLP19338 710 aaKnown RBP16.18■□□□□ 0.18
SDF2-202ENST00000585428 RFC5P40937 340 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 EPHA7Q15375 998 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 C15orf39Q6ZRI6 1047 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 TAS1R1Q7RTX1 841 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 SMG8Q8ND04 991 aaKnown RBP16.18■□□□□ 0.18
SDF2-202ENST00000585428 URGCPQ8TCY9 931 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 PSPC1Q8WXF1 523 aaKnown RBP16.18■□□□□ 0.18
SDF2-202ENST00000585428 SFXN1Q9H9B4 322 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 RSAD1Q9HA92 442 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 CNTNAP2Q9UHC6 1331 aa16.18■□□□□ 0.18
SDF2-202ENST00000585428 ZBTB39O15060 712 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 INPPL1O15357 1258 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 POMCP01189 267 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 GCFC2P16383 781 aaKnown RBP16.17■□□□□ 0.18
SDF2-202ENST00000585428 NPR3P17342 541 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 NBL1P41271 181 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 STK3Q13188 491 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 OTUD6AQ7L8S5 288 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 OTOP3Q7RTS5 596 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 NEK8Q86SG6 692 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 FERMT3Q86UX7 667 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 COLGALT2Q8IYK4 626 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 RNF168Q8IYW5 571 aaPredicted RBP16.17■□□□□ 0.18
SDF2-202ENST00000585428 CNNM3Q8NE01 707 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 ACSF2Q96CM8 615 aaPredicted RBP16.17■□□□□ 0.18
SDF2-202ENST00000585428 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
SDF2-202ENST00000585428 UBN1Q9NPG3 1134 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 MRPL17Q9NRX2 175 aaKnown RBP16.17■□□□□ 0.18
SDF2-202ENST00000585428 RGL1Q9NZL6 768 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 WDR81Q562E7 1941 aa16.17■□□□□ 0.18
SDF2-202ENST00000585428 GAS2O43903 313 aaKnown RBP16.16■□□□□ 0.18
SDF2-202ENST00000585428 SLITRK3O94933 977 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 PAPLNO95428 1278 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 SOD2P04179 222 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 SSBP05455 408 aaKnown RBP eCLIP16.16■□□□□ 0.18
SDF2-202ENST00000585428 YWHABP31946 246 aaKnown RBP16.16■□□□□ 0.18
SDF2-202ENST00000585428 POU5F1BQ06416 359 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 SPIRE1Q08AE8 756 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 TDGQ13569 410 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 PCBP1Q15365 356 aaKnown RBP eCLIP16.16■□□□□ 0.18
SDF2-202ENST00000585428 KIAA0319Q5VV43 1072 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 CPLX2Q6PUV4 134 aaKnown RBP16.16■□□□□ 0.18
SDF2-202ENST00000585428 ASCL5Q7RTU5 278 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 RNF149Q8NC42 400 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 CMASQ8NFW8 434 aaPredicted RBP16.16■□□□□ 0.18
SDF2-202ENST00000585428 TCP11Q8WWU5 503 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 FAM193BQ96PV7 902 aaPredicted RBP16.16■□□□□ 0.18
SDF2-202ENST00000585428 RPS6KC1Q96S38 1066 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 KCNK12Q9HB15 430 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 MIOSQ9NXC5 875 aa16.16■□□□□ 0.18
SDF2-202ENST00000585428 MYO10Q9HD67 2058 aa16.15■□□□□ 0.18
SDF2-202ENST00000585428 CCDC194A0A1B0GVG4 234 aa16.15■□□□□ 0.18
SDF2-202ENST00000585428 PI15O43692 258 aa16.15■□□□□ 0.18
SDF2-202ENST00000585428 CCNT1O60563 726 aaKnown RBP16.15■□□□□ 0.18
SDF2-202ENST00000585428 AXLP30530 894 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms