RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 MTHFRP42898 656 aa18.27■□□□□ 0.52
LSM12-202ENST00000585388 CYP4A11Q02928 519 aa18.27■□□□□ 0.52
LSM12-202ENST00000585388 NR5A1Q13285 461 aa18.27■□□□□ 0.52
LSM12-202ENST00000585388 PCBP1Q15365 356 aaKnown RBP eCLIP18.27■□□□□ 0.52
LSM12-202ENST00000585388 MRPL10Q7Z7H8 261 aaKnown RBP18.27■□□□□ 0.52
LSM12-202ENST00000585388 FERMT3Q86UX7 667 aa18.27■□□□□ 0.52
LSM12-202ENST00000585388 RNF149Q8NC42 400 aa18.27■□□□□ 0.52
LSM12-202ENST00000585388 CNNM3Q8NE01 707 aa18.27■□□□□ 0.52
LSM12-202ENST00000585388 PRRX2Q99811 253 aa18.27■□□□□ 0.52
LSM12-202ENST00000585388 TSHZ2Q9NRE2 1034 aa18.27■□□□□ 0.52
LSM12-202ENST00000585388 KANSL3Q9P2N6 904 aa18.27■□□□□ 0.52
LSM12-202ENST00000585388 SLC11A1P49279 550 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 MXD4Q14582 209 aaPredicted RBP18.26■□□□□ 0.51
LSM12-202ENST00000585388 EARS2Q5JPH6 523 aaKnown RBP18.26■□□□□ 0.51
LSM12-202ENST00000585388 AGMOQ6ZNB7 445 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 ALYREFQ86V81 257 aaKnown RBP18.26■□□□□ 0.51
LSM12-202ENST00000585388 PPFIBP1Q86W92 1011 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 FBXL6Q8N531 539 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 BCL7CQ8WUZ0 217 aaPredicted RBP18.26■□□□□ 0.51
LSM12-202ENST00000585388 AUTS2Q8WXX7 1259 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 TNFRSF25Q93038 417 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 GTF3C6Q969F1 213 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 CCDC51Q96ER9 411 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 CCDC43Q96MW1 224 aaKnown RBP18.26■□□□□ 0.51
LSM12-202ENST00000585388 FAM193BQ96PV7 902 aaPredicted RBP18.26■□□□□ 0.51
LSM12-202ENST00000585388 POMKQ9H5K3 350 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 MINDY3Q9H8M7 445 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 UBN1Q9NPG3 1134 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 DNAJB4Q9UDY4 337 aa18.26■□□□□ 0.51
LSM12-202ENST00000585388 DENND4AQ7Z401 1863 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 FAM205CA6NFA0 338 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 EIF5BO60841 1220 aaKnown RBP18.25■□□□□ 0.51
LSM12-202ENST00000585388 LYPLA2O95372 231 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 SP100P23497 879 aaPredicted RBP18.25■□□□□ 0.51
LSM12-202ENST00000585388 AXLP30530 894 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 HOXA11P31270 313 aaPredicted RBP18.25■□□□□ 0.51
LSM12-202ENST00000585388 NCBP1Q09161 790 aaKnown RBP18.25■□□□□ 0.51
LSM12-202ENST00000585388 TRIM29Q14134 588 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 TFDP1Q14186 410 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 CTTNQ14247 550 aaKnown RBP18.25■□□□□ 0.51
LSM12-202ENST00000585388 CALCRLQ16602 461 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 KIAA1841Q6NSI8 718 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 TPH2Q8IWU9 490 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 EIF2AK1Q9BQI3 630 aaKnown RBP18.25■□□□□ 0.51
LSM12-202ENST00000585388 TMEM175Q9BSA9 504 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 PCDHA12Q9UN75 941 aa18.25■□□□□ 0.51
LSM12-202ENST00000585388 NEMFO60524 1076 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 DTNBO60941 627 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 FDPSP14324 419 aaKnown RBP18.24■□□□□ 0.51
LSM12-202ENST00000585388 NCLP19338 710 aaKnown RBP18.24■□□□□ 0.51
LSM12-202ENST00000585388 PTPN14Q15678 1187 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 UBXN11Q5T124 520 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 RARS2Q5T160 578 aaKnown RBP18.24■□□□□ 0.51
LSM12-202ENST00000585388 NOTUMQ6P988 496 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 ZNF280BQ86YH2 543 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 NECAB1Q8N987 351 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 EMILIN2Q9BXX0 1053 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 ANKEF1Q9NU02 776 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 CDH22Q9UJ99 828 aa18.24■□□□□ 0.51
LSM12-202ENST00000585388 B4GALT3O60512 393 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 TSPAN1O60635 241 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 DGAT1O75907 488 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 SLITRK3O94933 977 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 ITGA4P13612 1032 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 EPCAMP16422 314 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 MRE11P49959 708 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 PTPN5P54829 565 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 PTENP60484 403 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 POU5F1BQ06416 359 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 MTMR3Q13615 1198 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 ME3Q16798 604 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 CABP7Q86V35 215 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 IFNLR1Q8IU57 520 aaPredicted RBP18.23■□□□□ 0.51
LSM12-202ENST00000585388 DIS3L2Q8IYB7 885 aaKnown RBP18.23■□□□□ 0.51
LSM12-202ENST00000585388 TDRD5Q8NAT2 981 aaKnown RBP18.23■□□□□ 0.51
LSM12-202ENST00000585388 SLC22A17Q8WUG5 538 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 ASIC4Q96FT7 647 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 VN1R3Q9BXE9 311 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 SFXN1Q9H9B4 322 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 XPNPEP1Q9NQW7 623 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 SORCS3Q9UPU3 1222 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 FAN1Q9Y2M0 1017 aa18.23■□□□□ 0.51
LSM12-202ENST00000585388 TDRD15B5MCY1 1934 aaKnown RBP18.23■□□□□ 0.51
LSM12-202ENST00000585388 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 C2CD4DB7Z1M9 353 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 INO80B-WBP1J3KQ70 363 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 DDHD2O94830 711 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 LARGE1O95461 756 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 POMCP01189 267 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 ALDH2P05091 517 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 ATAT1Q5SQI0 421 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 UBALD2Q8IYN6 164 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 HACE1Q8IYU2 909 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 KREMEN2Q8NCW0 462 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 SMG8Q8ND04 991 aaKnown RBP18.22■□□□□ 0.51
LSM12-202ENST00000585388 NSUN7Q8NE18 718 aaKnown RBP18.22■□□□□ 0.51
LSM12-202ENST00000585388 HSD17B14Q9BPX1 270 aa18.22■□□□□ 0.51
LSM12-202ENST00000585388 TTC12Q9H892 705 aaPredicted RBP18.22■□□□□ 0.51
LSM12-202ENST00000585388 MRPL17Q9NRX2 175 aaKnown RBP18.22■□□□□ 0.51
LSM12-202ENST00000585388 DBR1Q9UK59 544 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms