RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 UBE2TQ9NPD8 197 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 LOXHD1Q8IVV2 1947 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 FAM170AA1A519 330 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 FTLP02792 175 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 HSPA6P17066 643 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 QPCTQ16769 361 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CCDC174Q6PII3 467 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 HOOK3Q86VS8 718 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 UBL4BQ8N7F7 174 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CEP89Q96ST8 783 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 TEKT3Q9BXF9 490 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RANBP17Q9H2T7 1088 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ARHGEF10LQ9HCE6 1279 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CTTNBP2NLQ9P2B4 639 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RASAL2Q9UJF2 1139 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 TMX2Q9Y320 296 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 EMSYQ7Z589 1322 aa15.33■□□□□ 0.04
CDK5RAP3-237ENST00000585163 IPO5O00410 1097 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 P4HA2O15460 535 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PHF2O75151 1096 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PMS2P54278 862 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CETN1Q12798 172 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 SWT1Q5T5J6 900 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ZDHHC24Q6UX98 284 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ACER1Q8TDN7 264 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CABS1Q96KC9 395 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 K7ENM7 598 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CAND2O75155 1236 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CHRNA3P32297 505 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PTGIRP43119 386 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PLTPP55058 493 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 GPC5P78333 572 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PPP3CAQ08209 521 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 BYSLQ13895 437 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 EPC2Q52LR7 807 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 AADACL2Q6P093 401 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PADI6Q6TGC4 694 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ARHGEF19Q8IW93 802 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 FBXO25Q8TCJ0 367 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 NEK9Q8TD19 979 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 KRT35Q92764 455 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 TATDN2Q93075 761 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CENPTQ96BT3 561 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 C18orf8Q96DM3 657 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RPS6KC1Q96S38 1066 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RIT2Q99578 217 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ZSWIM1Q9BR11 485 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PCYOX1Q9UHG3 505 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 HERC5Q9UII4 1024 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 SNX24Q9Y343 169 aa15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MRPL11Q9Y3B7 192 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-237ENST00000585163 SHBGP04278 402 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CTNNA2P26232 953 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 VAMP7P51809 220 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CDR1P51861 262 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CCDC121Q6ZUS5 278 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CCDC13Q8IYE1 715 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PRELID2Q8N945 189 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PGM2Q96G03 612 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 SEC16BQ96JE7 1060 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 TMEM206Q9H813 350 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 GRHL1Q9NZI5 618 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 LARSQ9P2J5 1176 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MAPTP10636 758 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MARCKSL1P49006 195 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PEX5P50542 639 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ALCAMQ13740 583 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 FAM43BQ6ZT52 329 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RPUSD2Q8IZ73 545 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CHURC1Q8WUH1 139 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PCIF1Q9H4Z3 704 aa15.31■□□□□ 0.04
CDK5RAP3-237ENST00000585163 TISP43B9A030 160 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PODXLO00592 558 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RTN2O75298 545 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MTA2O94776 668 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 GBP1P32455 592 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 SMTNP53814 917 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 C1orf220Q5T0J3 134 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ERMARDQ5T6L9 678 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 DENND2CQ68D51 928 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ZDHHC14Q8IZN3 488 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RNF25Q96BH1 459 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 OSBPL7Q9BZF2 842 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PNMA2Q9UL42 364 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 BCS1LQ9Y276 419 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PCDHA3Q9Y5H8 950 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CCDC169A6NNP5 214 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 GGPS1O95749 300 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 GCLMP48507 274 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 COL23A1Q86Y22 540 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CACNA2D3Q8IZS8 1091 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MDM1Q8TC05 714 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 XPO6Q96QU8 1125 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PLCD4Q9BRC7 762 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms