RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 RCAN1P53805 252 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 PFKPQ01813 784 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 AKAP17AQ02040 695 aaKnown RBP9.5□□□□□ -0.89
SRSF1-207ENST00000584668 PPP2R5DQ14738 602 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 VARS2Q5ST30 1063 aaKnown RBP9.5□□□□□ -0.89
SRSF1-207ENST00000584668 KANK3Q6NY19 840 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 APOA5Q6Q788 366 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 MTSS1LQ765P7 747 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 RAB11FIP4Q86YS3 637 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 RHPN2Q8IUC4 686 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 SLC44A3Q8N4M1 653 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 CCDC148Q8NFR7 591 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 GPR152Q8TDT2 470 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 LPPQ93052 612 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 ZNF668Q96K58 619 aaPredicted RBP9.5□□□□□ -0.89
SRSF1-207ENST00000584668 RPS6KC1Q96S38 1066 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 TEKT3Q9BXF9 490 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 SLC2A4RGQ9NR83 387 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 SPATA6Q9NWH7 488 aaPredicted RBP9.5□□□□□ -0.89
SRSF1-207ENST00000584668 GMEB2Q9UKD1 530 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 NCOR2Q9Y618 2525 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 EPG5Q9HCE0 2579 aa9.5□□□□□ -0.89
SRSF1-207ENST00000584668 A0A087WZ62 844 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 ESYT2A0FGR8 921 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 NCAM2O15394 837 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 CHMP2AO43633 222 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 DKC1O60832 514 aaKnown RBP eCLIP9.49□□□□□ -0.89
SRSF1-207ENST00000584668 OFD1O75665 1012 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 FGD1P98174 961 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 PRKCQQ04759 706 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 NCBP1Q09161 790 aaKnown RBP9.49□□□□□ -0.89
SRSF1-207ENST00000584668 MTERF2Q49AM1 385 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 XKR3Q5GH77 459 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 LRCH2Q5VUJ6 765 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 RSPO2Q6UXX9 243 aaPredicted RBP9.49□□□□□ -0.89
SRSF1-207ENST00000584668 SLC7A3Q8WY07 619 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 NLRP4Q96MN2 994 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 CNTNAP3BQ96NU0 1288 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 RIT2Q99578 217 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 FDXACB1Q9BRP7 624 aaPredicted RBP9.49□□□□□ -0.89
SRSF1-207ENST00000584668 RTKNQ9BST9 563 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 CNTNAP3Q9BZ76 1288 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 C22orf23Q9BZE7 217 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 AGPAT5Q9NUQ2 364 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 SUCLA2Q9P2R7 463 aaPredicted RBP9.49□□□□□ -0.89
SRSF1-207ENST00000584668 DNAJB4Q9UDY4 337 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 RAB23Q9ULC3 237 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 NAP1L2Q9ULW6 460 aaPredicted RBP9.49□□□□□ -0.89
SRSF1-207ENST00000584668 PCDHB2Q9Y5E7 798 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 TAF6LQ9Y6J9 622 aa9.49□□□□□ -0.89
SRSF1-207ENST00000584668 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
SRSF1-207ENST00000584668 TPRP12270 2363 aaKnown RBP9.48□□□□□ -0.89
SRSF1-207ENST00000584668 TEX28O15482 410 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 ERLIN2O94905 339 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 LAMP2P13473 410 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 OR1G1P47890 313 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 STARD6P59095 220 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 PCBP1Q15365 356 aaKnown RBP eCLIP9.48□□□□□ -0.89
SRSF1-207ENST00000584668 PFKFB3Q16875 520 aaPredicted RBP9.48□□□□□ -0.89
SRSF1-207ENST00000584668 LONRF3Q496Y0 759 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 LIN9Q5TKA1 542 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 MIER3Q7Z3K6 550 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 EXOC6Q8TAG9 804 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 BCL7CQ8WUZ0 217 aaPredicted RBP9.48□□□□□ -0.89
SRSF1-207ENST00000584668 RSAD2Q8WXG1 361 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 LRRC2Q9BYS8 371 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 OSBPL6Q9BZF3 934 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 ZMYND12Q9H0C1 365 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 USP18Q9UMW8 372 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 PPME1Q9Y570 386 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 NUMBLQ9Y6R0 609 aa9.48□□□□□ -0.89
SRSF1-207ENST00000584668 KMT2BQ9UMN6 2715 aaPredicted RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 ACACBO00763 2458 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 KANSL1LA0AUZ9 987 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 NRP1O14786 923 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 SLC27A2O14975 620 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 GAS2O43903 313 aaKnown RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 POMCP01189 267 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 IGHDP01880 384 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 HMGB1P09429 215 aaKnown RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 ITGA4P13612 1032 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 FSHRP23945 695 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 CIITAP33076 1130 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 HTR4Q13639 388 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 UBXN2BQ14CS0 331 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 MLF2Q15773 248 aaPredicted RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 ST3GAL2Q16842 350 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 CREB3L3Q68CJ9 461 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 SRGAP1Q7Z6B7 1085 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 ZNF280BQ86YH2 543 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 GPR65Q8IYL9 337 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 PSPC1Q8WXF1 523 aaKnown RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 CRYGNQ8WXF5 182 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 CCDC51Q96ER9 411 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 MYADMQ96S97 322 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 COLEC11Q9BWP8 271 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 VN1R3Q9BXE9 311 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 NIFKQ9BYG3 293 aaKnown RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 FAM126AQ9BYI3 521 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 310.7 ms