RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 IRAK4Q9NWZ3 460 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 UBE4BO95155 1302 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 UBN2Q6ZU65 1347 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 ARHGEF5Q12774 1597 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 LOC102724428A0A0B4J2F2 783 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 SIK1P57059 783 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 ROR1Q01973 937 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 MAP3K10Q02779 954 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 TXNRD1Q16881 649 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 LONP2Q86WA8 852 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 PAWRQ96IZ0 340 aaKnown RBP13.85□□□□□ -0.19
RNF43-208ENST00000584437 PKD2L2Q9NZM6 624 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 BFARQ9NZS9 450 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 SFI1A8K8P3 1242 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 H0Y626 953 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 ZBTB5O15062 677 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 BBOX1O75936 387 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 TRIM16O95361 564 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 KCNA3P22001 575 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 TRPC1P48995 793 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 CEP55Q53EZ4 464 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 DAB2IPQ5VWQ8 1189 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 KIRREL3Q8IZU9 778 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 SH2D3CQ8N5H7 860 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 CDC26Q8NHZ8 85 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 DNAJC9Q8WXX5 260 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 DPF2Q92785 391 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 TBC1D23Q9NUY8 699 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 FAM107AO95990 144 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 SLC18A3Q16572 532 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 LRRC8BQ6P9F7 803 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 SGMS1Q86VZ5 419 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 METTL16Q86W50 562 aaKnown RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 HEY1Q9Y5J3 304 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 hCG_2014768A0A024R1R8 64 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 ITIH2P19823 946 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 CCNA1P78396 465 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 FAM98CQ17RN3 349 aaKnown RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 USPL1Q5W0Q7 1092 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 TMEM270Q6UE05 265 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 KCNK16Q96T55 309 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 ROPN1BQ9BZX4 212 aaPredicted RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 ROPN1Q9HAT0 212 aaPredicted RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 PALMDQ9NP74 551 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 EIF4E1BA6NMX2 242 aaKnown RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 PSMD14O00487 310 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 PSMC1P62191 440 aaKnown RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 HIF1AQ16665 826 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 HEATR6Q6AI08 1181 aaKnown RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 FRA10AC1Q70Z53 315 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 GLYCTKQ8IVS8 523 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 C3orf20Q8ND61 904 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 SEPT8Q92599 483 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 MRGBPQ9NV56 204 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 ZSCAN20P17040 1043 aaPredicted RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 FGFR4P22455 802 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 TYK2P29597 1187 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 CAPRIN1Q14444 709 aaKnown RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 INPP5AQ14642 412 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 FOXP4Q8IVH2 680 aaPredicted RBP13.84□□□□□ -0.19
RNF43-208ENST00000584437 TTC39CQ8N584 583 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 USP6NLQ92738 828 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 ZBTB1Q9Y2K1 713 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 HEG1Q9ULI3 1381 aa13.84□□□□□ -0.19
RNF43-208ENST00000584437 GTPBP10A4D1E9 387 aaKnown RBP13.83□□□□□ -0.19
RNF43-208ENST00000584437 PHF2O75151 1096 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 GDF11O95390 407 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 ANP32DO95626 131 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 SRGNP10124 158 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 TMEM154Q6P9G4 183 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 PADI6Q6TGC4 694 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 KIAA2013Q8IYS2 634 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 PIGOQ8TEQ8 1089 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 CYFIP2Q96F07 1278 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.19
RNF43-208ENST00000584437 CCT8L1PA6NM43 557 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 SDC4P31431 198 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 DAB2P98082 770 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 CYLC2Q14093 348 aaPredicted RBP13.83□□□□□ -0.2
RNF43-208ENST00000584437 POTEAQ6S8J7 498 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 RAPGEF5Q92565 580 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 CCDC134Q9H6E4 229 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 ATP6V0A4Q9HBG4 840 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 WDR70Q9NW82 654 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 KIF17Q9P2E2 1029 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 SLC9A2Q9UBY0 812 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 C16orf96A6NNT2 1141 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 NFKBIAP25963 317 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 ITPRIPL1Q6GPH6 555 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 FSD1LQ9BXM9 530 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 DDX28Q9NUL7 540 aaKnown RBP13.83□□□□□ -0.2
RNF43-208ENST00000584437 ZNF229Q9UJW7 825 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 PPEF1O14829 653 aaPredicted RBP13.83□□□□□ -0.2
RNF43-208ENST00000584437 ESRRBO95718 433 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 MARK3P27448 753 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 PSMD7P51665 324 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 BCAR1P56945 870 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms