RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-233ENST00000584186 KHSRPQ92945 711 aaKnown RBP eCLIP15.13■□□□□ 0.01
CDK5RAP3-233ENST00000584186 TMEM169Q96HH4 297 aa15.13■□□□□ 0.01
CDK5RAP3-233ENST00000584186 TMX3Q96JJ7 454 aa15.13■□□□□ 0.01
CDK5RAP3-233ENST00000584186 CLEC1BQ9P126 229 aa15.13■□□□□ 0.01
CDK5RAP3-233ENST00000584186 LRRIQ4A6NIV6 560 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 HIDE1A8MVS5 230 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 GLP2RO95838 553 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 RPA1P27694 616 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 CCT6AP40227 531 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 TOB1P50616 345 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 MBTD1Q05BQ5 628 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 PTGDRQ13258 359 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 DUSP6Q16828 381 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 HAUS3Q68CZ6 603 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 NOTUMQ6P988 496 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 PADI6Q6TGC4 694 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 AGMOQ6ZNB7 445 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 TMEM173Q86WV6 379 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 C4orf32Q8N8J7 132 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 MCPH1Q8NEM0 835 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 RSPH1Q8WYR4 309 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 MSLNLQ96KJ4 702 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 APOL6Q9BWW8 343 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 EIF2AQ9BY44 585 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 NRDE2Q9H7Z3 1164 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 RSAD1Q9HA92 442 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 NGRNQ9NPE2 291 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 LRWD1Q9UFC0 647 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 DBR1Q9UK59 544 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 PCDHB6Q9Y5E3 794 aa15.12■□□□□ 0.01
CDK5RAP3-233ENST00000584186 H3BQV1 296 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 B4GALT5O43286 388 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 POMCP01189 267 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 ITGA4P13612 1032 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 NCLP19338 710 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 GJB2P29033 226 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 AXLP30530 894 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 FXR2P51116 673 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 AFF1P51825 1210 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 ZP2Q05996 745 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 SMC1AQ14683 1233 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 PCBP1Q15365 356 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 SMAD2Q15796 467 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 MRPL10Q7Z7H8 261 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 CDR2LQ86X02 465 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 ZNF280BQ86YH2 543 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 ADHFE1Q8IWW8 467 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 TMEM87AQ8NBN3 555 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 VN1R2Q8NFZ6 395 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 FAM193BQ96PV7 902 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 CDCA3Q99618 268 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 C1QTNF1Q9BXJ1 281 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 TRIM6Q9C030 488 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 DNAJB4Q9UDY4 337 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 PRKAG3Q9UGI9 489 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 IPPQ9Y573 584 aa15.11■□□□□ 0.01
CDK5RAP3-233ENST00000584186 CXCL14O95715 111 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 GALTP07902 379 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 SRGAP2BP0DMP2 458 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 ARF4P18085 180 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 LIG1P18858 919 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 SLC11A1P49279 550 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 POU5F1BQ06416 359 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 BMS1Q14692 1282 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 TMEM132AQ24JP5 1023 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 VPS52Q8N1B4 723 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 MRPL43Q8N983 215 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 SMG8Q8ND04 991 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 CNNM3Q8NE01 707 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 CCDC51Q96ER9 411 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 TBC1D32Q96NH3 1257 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 APOL5Q9BWW9 433 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 RAB34Q9BZG1 259 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 CSRNP2Q9H175 543 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 KANSL3Q9P2N6 904 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 KIAA1024Q9UPX6 916 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 HES2Q9Y543 173 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 CNTNAP2Q9UHC6 1331 aa15.1■□□□□ 0.01
CDK5RAP3-233ENST00000584186 FSD2A1L4K1 749 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 B4GALT3O60512 393 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 DDHD2O94830 711 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 MCM2P49736 904 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 COASYQ13057 564 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 ECM1Q16610 540 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 AMHR2Q16671 573 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 ZBTB8OSQ8IWT0 167 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 HACE1Q8IYU2 909 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 SMRP1Q8NCR6 262 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 SNX29Q8TEQ0 813 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 BCL7CQ8WUZ0 217 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 AUTS2Q8WXX7 1259 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 IGSF21Q96ID5 467 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 GAD1Q99259 594 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 NFKBIZQ9BYH8 718 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 BHMT2Q9H2M3 363 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 POLD4Q9HCU8 107 aa15.09■□□□□ 0.01
CDK5RAP3-233ENST00000584186 UBN1Q9NPG3 1134 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms