RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 GBP3Q9H0R5 595 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 SH3GLB2Q9NR46 395 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 USTQ9Y2C2 406 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 ZNF623O75123 536 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 MAFO75444 373 aaPredicted RBP22.91■■□□□ 1.26
SRSF1-206ENST00000583741 CTDNEP1O95476 244 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 SLC11A1P49279 550 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 DNM2P50570 870 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 GIT2Q14161 759 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 ANO5Q75V66 913 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 ASCL5Q7RTU5 278 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 ZNF280BQ86YH2 543 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 NSUN7Q8NE18 718 aaKnown RBP22.91■■□□□ 1.26
SRSF1-206ENST00000583741 ETNPPLQ8TBG4 499 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 NLRP4Q96MN2 994 aa22.91■■□□□ 1.26
SRSF1-206ENST00000583741 CYP3A7-CYP3A51PA0A087WV96 503 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 CDKL5O76039 1030 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 CYP3A7P24462 503 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 GJB2P29033 226 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 DDIT3P35638 169 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 RNASELQ05823 741 aaKnown RBP22.9■■□□□ 1.26
SRSF1-206ENST00000583741 PLA2G4FQ68DD2 849 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 ASTLQ6HA08 431 aaPredicted RBP22.9■■□□□ 1.26
SRSF1-206ENST00000583741 CATSPER4Q7RTX7 472 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 CABP7Q86V35 215 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 INO80BQ9C086 356 aaPredicted RBP22.9■■□□□ 1.26
SRSF1-206ENST00000583741 IFT122Q9HBG6 1241 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 PCDHA4Q9UN74 947 aa22.9■■□□□ 1.26
SRSF1-206ENST00000583741 DDX11L8A8MPP1 907 aa22.89■■□□□ 1.25
SRSF1-206ENST00000583741 M0R2N6 131 aa22.89■■□□□ 1.25
SRSF1-206ENST00000583741 JAK2O60674 1132 aa22.89■■□□□ 1.25
SRSF1-206ENST00000583741 DTNBO60941 627 aa22.89■■□□□ 1.25
SRSF1-206ENST00000583741 SKIP12755 728 aa22.89■■□□□ 1.25
SRSF1-206ENST00000583741 RAB27AP51159 221 aa22.89■■□□□ 1.25
SRSF1-206ENST00000583741 AFF1P51825 1210 aaKnown RBP22.89■■□□□ 1.25
SRSF1-206ENST00000583741 PLCD3Q8N3E9 789 aa22.89■■□□□ 1.25
SRSF1-206ENST00000583741 MBOAT7Q96N66 472 aa22.89■■□□□ 1.25
SRSF1-206ENST00000583741 GVINP1Q7Z2Y8 2422 aa22.89■■□□□ 1.25
SRSF1-206ENST00000583741 NBL1P41271 181 aa22.88■■□□□ 1.25
SRSF1-206ENST00000583741 HMGN5P82970 282 aaKnown RBP22.88■■□□□ 1.25
SRSF1-206ENST00000583741 NPY5RQ15761 445 aa22.88■■□□□ 1.25
SRSF1-206ENST00000583741 AGMOQ6ZNB7 445 aa22.88■■□□□ 1.25
SRSF1-206ENST00000583741 SFXN1Q9H9B4 322 aa22.88■■□□□ 1.25
SRSF1-206ENST00000583741 CYP26B1Q9NR63 512 aa22.88■■□□□ 1.25
SRSF1-206ENST00000583741 AGPAT5Q9NUQ2 364 aa22.88■■□□□ 1.25
SRSF1-206ENST00000583741 PCDHB2Q9Y5E7 798 aa22.88■■□□□ 1.25
SRSF1-206ENST00000583741 CARNS1A5YM72 827 aa22.87■■□□□ 1.25
SRSF1-206ENST00000583741 DDHD2O94830 711 aa22.87■■□□□ 1.25
SRSF1-206ENST00000583741 SSBP05455 408 aaKnown RBP eCLIP22.87■■□□□ 1.25
SRSF1-206ENST00000583741 CWF19L1Q69YN2 538 aaKnown RBP22.87■■□□□ 1.25
SRSF1-206ENST00000583741 GPR149Q86SP6 731 aa22.87■■□□□ 1.25
SRSF1-206ENST00000583741 MFSD1Q9H3U5 465 aa22.87■■□□□ 1.25
SRSF1-206ENST00000583741 CIZ1Q9ULV3 898 aaPredicted RBP22.87■■□□□ 1.25
SRSF1-206ENST00000583741 PRR23AA6NEV1 266 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 EML1O00423 815 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 CNPP09543 421 aaKnown RBP22.86■■□□□ 1.25
SRSF1-206ENST00000583741 CLCN4P51793 760 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 NPEPPSP55786 919 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 PSMC5P62195 406 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 PPFIBP1Q86W92 1011 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 ZNF579Q8NAF0 562 aaKnown RBP22.86■■□□□ 1.25
SRSF1-206ENST00000583741 KLHL5Q96PQ7 755 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 MINDY3Q9H8M7 445 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 COL4A3BPQ9Y5P4 624 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 ARID2Q68CP9 1835 aa22.86■■□□□ 1.25
SRSF1-206ENST00000583741 SLC37A4O43826 429 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 CCDC149Q6ZUS6 474 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 BLIDQ8IZY5 108 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 PGBD4Q96DM1 585 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 CHMP5Q9NZZ3 219 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 KIF3AQ9Y496 699 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 ZNF292O60281 2723 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 LILRB3O75022 631 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 CLCN5P51795 746 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 UBXN11Q5T124 520 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 MOXD1Q6UVY6 613 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 MRPL10Q7Z7H8 261 aaKnown RBP22.85■■□□□ 1.25
SRSF1-206ENST00000583741 TRIM22Q8IYM9 498 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 FAM184AQ8NB25 1140 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 FLCNQ8NFG4 579 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 URGCPQ8TCY9 931 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 ACSF2Q96CM8 615 aaPredicted RBP22.85■■□□□ 1.25
SRSF1-206ENST00000583741 AIFM3Q96NN9 605 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 EMILIN2Q9BXX0 1053 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 RSAD1Q9HA92 442 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 WRAP73Q9P2S5 460 aaPredicted RBP22.85■■□□□ 1.25
SRSF1-206ENST00000583741 DDX25Q9UHL0 483 aaKnown RBP22.85■■□□□ 1.25
SRSF1-206ENST00000583741 VAV3Q9UKW4 847 aa22.85■■□□□ 1.25
SRSF1-206ENST00000583741 KLRC2P26717 231 aa22.84■■□□□ 1.25
SRSF1-206ENST00000583741 HOXA11P31270 313 aaPredicted RBP22.84■■□□□ 1.25
SRSF1-206ENST00000583741 SSRP1Q08945 709 aaKnown RBP22.84■■□□□ 1.25
SRSF1-206ENST00000583741 OTOP3Q7RTS5 596 aa22.84■■□□□ 1.25
SRSF1-206ENST00000583741 FRMD5Q7Z6J6 570 aa22.84■■□□□ 1.25
SRSF1-206ENST00000583741 DAGLBQ8NCG7 672 aa22.84■■□□□ 1.25
SRSF1-206ENST00000583741 JPH2Q9BR39 696 aaPredicted RBP22.84■■□□□ 1.25
SRSF1-206ENST00000583741 ORC3Q9UBD5 711 aaPredicted RBP22.84■■□□□ 1.25
SRSF1-206ENST00000583741 STK36Q9NRP7 1315 aa22.83■■□□□ 1.25
SRSF1-206ENST00000583741 SPDYE4A6NLX3 237 aa22.83■■□□□ 1.25
SRSF1-206ENST00000583741 PI15O43692 258 aa22.83■■□□□ 1.25
SRSF1-206ENST00000583741 POMCP01189 267 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms