RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 XKR9Q5GH70 373 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 RARS2Q5T160 578 aaKnown RBP16.15■□□□□ 0.18
ITGB4-208ENST00000582629 MRPL10Q7Z7H8 261 aaKnown RBP16.15■□□□□ 0.18
ITGB4-208ENST00000582629 FERMT3Q86UX7 667 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 PPFIBP1Q86W92 1011 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 PRSS33Q8NF86 280 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 BCL7CQ8WUZ0 217 aaPredicted RBP16.15■□□□□ 0.18
ITGB4-208ENST00000582629 MTRQ99707 1265 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 TMEM175Q9BSA9 504 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 GBP3Q9H0R5 595 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 MINDY3Q9H8M7 445 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 RSAD1Q9HA92 442 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 BRMS1Q9HCU9 246 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 BMP2KQ9NSY1 1161 aaPredicted RBP16.15■□□□□ 0.18
ITGB4-208ENST00000582629 RGL1Q9NZL6 768 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 KANSL3Q9P2N6 904 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 ORC3Q9UBD5 711 aaPredicted RBP16.15■□□□□ 0.18
ITGB4-208ENST00000582629 DNAJB4Q9UDY4 337 aa16.15■□□□□ 0.18
ITGB4-208ENST00000582629 C2CD4DB7Z1M9 353 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 CTDNEP1O95476 244 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 EPCAMP16422 314 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 HOXA11P31270 313 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-208ENST00000582629 KRT2P35908 639 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 ANAPC15P60006 121 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 SPIRE1Q08AE8 756 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 PCBP1Q15365 356 aaKnown RBP eCLIP16.14■□□□□ 0.17
ITGB4-208ENST00000582629 PTPN14Q15678 1187 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 EARS2Q5JPH6 523 aaKnown RBP16.14■□□□□ 0.17
ITGB4-208ENST00000582629 UBXN11Q5T124 520 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 KIAA1841Q6NSI8 718 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 RNF149Q8NC42 400 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 CNNM3Q8NE01 707 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 SLC22A17Q8WUG5 538 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 DYDC2Q96IM9 177 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 FAM193BQ96PV7 902 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-208ENST00000582629 DENND4AQ7Z401 1863 aa16.14■□□□□ 0.17
ITGB4-208ENST00000582629 B4GALT3O60512 393 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 DDHD2O94830 711 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 ERLIN2O94905 339 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 ALDH2P05091 517 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 NCLP19338 710 aaKnown RBP16.13■□□□□ 0.17
ITGB4-208ENST00000582629 CYP4A11Q02928 519 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 MTMR3Q13615 1198 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 CTTNQ14247 550 aaKnown RBP16.13■□□□□ 0.17
ITGB4-208ENST00000582629 ATAT1Q5SQI0 421 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 IER5LQ5T953 404 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 ZNF280BQ86YH2 543 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 C12orf76Q8N812 135 aaPredicted RBP16.13■□□□□ 0.17
ITGB4-208ENST00000582629 KREMEN2Q8NCW0 462 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 CCDC51Q96ER9 411 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 VN1R3Q9BXE9 311 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 EMILIN2Q9BXX0 1053 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 UBN1Q9NPG3 1134 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 SORCS3Q9UPU3 1222 aa16.13■□□□□ 0.17
ITGB4-208ENST00000582629 TDRD15B5MCY1 1934 aaKnown RBP16.12■□□□□ 0.17
ITGB4-208ENST00000582629 FAM205CA6NFA0 338 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 SLITRK3O94933 977 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 WEE2P0C1S8 567 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 AXLP30530 894 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 AK2P54819 239 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 NR5A1Q13285 461 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 MXD4Q14582 209 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-208ENST00000582629 CABP7Q86V35 215 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 TPH2Q8IWU9 490 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 UBALD2Q8IYN6 164 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 ZDHHC14Q8IZN3 488 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 TDRD5Q8NAT2 981 aaKnown RBP16.12■□□□□ 0.17
ITGB4-208ENST00000582629 TNFRSF25Q93038 417 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 KLHL5Q96PQ7 755 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 SFXN1Q9H9B4 322 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 USTQ9Y2C2 406 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 FAN1Q9Y2M0 1017 aa16.12■□□□□ 0.17
ITGB4-208ENST00000582629 ZBTB39O15060 712 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 TSPAN1O60635 241 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 DTNBO60941 627 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 LYPLA2O95372 231 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 POMCP01189 267 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 ITGA4P13612 1032 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 FDPSP14324 419 aaKnown RBP16.11■□□□□ 0.17
ITGB4-208ENST00000582629 VCPP55072 806 aaKnown RBP16.11■□□□□ 0.17
ITGB4-208ENST00000582629 PTENP60484 403 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
ITGB4-208ENST00000582629 TCF15Q12870 199 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 TFDP1Q14186 410 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 CALCRLQ16602 461 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 SMG8Q8ND04 991 aaKnown RBP16.11■□□□□ 0.17
ITGB4-208ENST00000582629 EIF2AK1Q9BQI3 630 aaKnown RBP16.11■□□□□ 0.17
ITGB4-208ENST00000582629 XPNPEP1Q9NQW7 623 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 DBR1Q9UK59 544 aaKnown RBP16.11■□□□□ 0.17
ITGB4-208ENST00000582629 PCDHA12Q9UN75 941 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 IPPQ9Y573 584 aa16.11■□□□□ 0.17
ITGB4-208ENST00000582629 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 NRP1O14786 923 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 INPPL1O15357 1258 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 LILRB3O75022 631 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 DGAT1O75907 488 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 CNPP09543 421 aaKnown RBP16.1■□□□□ 0.17
ITGB4-208ENST00000582629 KLRC2P26717 231 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 AVPR2P30518 371 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 CLCN4P51793 760 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms